DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R1 and Gpr39

DIOPT Version :10

Sequence 1:NP_731790.1 Gene:PK2-R1 / 41639 FlyBaseID:FBgn0038140 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001107864.1 Gene:Gpr39 / 288995 RGDID:1306745 Length:456 Species:Rattus norvegicus


Alignment Length:400 Identity:103/400 - (25%)
Similarity:182/400 - (45%) Gaps:56/400 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LLGSTNGTNASTMAAD-SPVDE---SLTLRTALTVCYALIFVAGVLGNLIT---CIVISRNNFMH 139
            :..|:..:|..:...| |.|.|   :..::..||:.|.::||.|:|||.:|   ..|:.:..::.
  Rat     1 MASSSGSSNICSRVIDHSHVPEFEVATWIKITLTLVYLIVFVVGILGNSVTIRVTQVLQKKGYLQ 65

  Fly   140 TATNFYLFNLAVSDLILLVSGIPQELYN-LWYPDMYPFTDAMCIMGSVLSEMAANATVLTITAFT 203
            .....::.:||.||:::.:.|:|.|.|: :|.|...|.....|.:.:.|.|..:.||:|.:...:
  Rat    66 KEVTDHMISLACSDILVFLIGMPMEFYSIIWNPLTTPSYALSCKLHTFLFETCSYATLLHVLTLS 130

  Fly   204 VERYIAICHPFRQHTMSKLSRAIKFIFAIWLAAFLLALPQAMQFSVVY------QNEGYSC---- 258
            .|||||||||||...:|...:....|..:|:.:.|:|||......:.|      .::|.:|    
  Rat   131 FERYIAICHPFRYKDVSGPCQVKLLIGFVWVTSALVALPLLFAMGIEYPLANVPTHKGLNCNLSR 195

  Fly   259 TMEND-------------------FYAHVF-AVSGFIFFGGPMTAICVLYVLIGVKLKRSRLLQS 303
            |..:|                   |.:.:| |.:.::.....:..:|...:.:.:|.||..|..:
  Rat   196 TRHHDHPGDSNMSICTNLSSRWEVFQSSIFGAFAVYLVVLVSVAFMCWNMMKVLMKSKRGTLAGT 260

  Fly   304 LPR---RTFDANRGLNAQGRVIRMLVAVAVAFFLCWAPFHAQRLMAVYGLNLINIGISRDAFNDY 365
            .|:   |..::.....|:.:.|..|..:.|...:||.|...:|:||.       .....|....|
  Rat   261 GPQLQLRKSESEESRTARRQTIIFLRLIVVTLAVCWMPNQIRRIMAA-------AKPKHDWTKSY 318

  Fly   366 FR---ILDYTSGVLYFLSTCINPLLYNIMSHKFREAF-KITLTRQFGLARNHHHQQSQHHQHNYS 426
            |:   ||...|...::||:.:||||||:.|.:||:.| ::...|   |...|.:|:.|...: :|
  Rat   319 FKAYMILLPFSDTFFYLSSVVNPLLYNVSSQQFRKVFWQVLCCR---LTLQHANQEKQQRAY-FS 379

  Fly   427 ALLRQNGSMR 436
            :....:.|.|
  Rat   380 STKNSSRSAR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R1NP_731790.1 7tmA_capaR 108..399 CDD:320262 88/330 (27%)
TM helix 1 108..135 CDD:320262 11/29 (38%)
TM helix 2 142..168 CDD:320262 8/26 (31%)
TM helix 3 181..211 CDD:320262 11/29 (38%)
TM helix 4 223..245 CDD:320262 6/21 (29%)
TM helix 5 265..294 CDD:320262 3/29 (10%)
TM helix 6 316..346 CDD:320262 8/29 (28%)
TM helix 7 367..392 CDD:320262 11/27 (41%)
Gpr39NP_001107864.1 7tmA_GPR39 31..355 CDD:320263 88/330 (27%)
TM helix 1 31..58 CDD:320263 10/26 (38%)
TM helix 2 68..94 CDD:320263 8/25 (32%)
TM helix 3 108..138 CDD:320263 11/29 (38%)
TM helix 4 150..172 CDD:320263 6/21 (29%)
TM helix 5 217..246 CDD:320263 4/28 (14%)
TM helix 6 276..306 CDD:320263 8/29 (28%)
TM helix 7 323..348 CDD:320263 11/24 (46%)

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