DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R1 and C24B5.1

DIOPT Version :9

Sequence 1:NP_731790.1 Gene:PK2-R1 / 41639 FlyBaseID:FBgn0038140 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_505381.2 Gene:C24B5.1 / 179301 WormBaseID:WBGene00016044 Length:427 Species:Caenorhabditis elegans


Alignment Length:433 Identity:90/433 - (20%)
Similarity:160/433 - (36%) Gaps:108/433 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 SESPEMLL---LKNDKFLTHVAHLLNITTENLSNLLGSTNGTNA----------STMAADSPVDE 102
            |.:.::||   :::|.....:.|.||.:.|...:.:.:|:....          .|:...||..|
 Worm     2 SSAAQLLLDSAVRDDDDPIFLYHHLNASLEAAKDAVNATSVKQILEAQTHYLFNDTIFGPSPAME 66

  Fly   103 SLTLRTALTVCYAL-----IFVAGVLGNLITCIVISRNNFMH-TATNFYLFNLAVSDLILLVSGI 161
            |...|:.:...|..     :|| |:.||.:..|:|..|..:: ..||.||..||....|.|:|.:
 Worm    67 STPGRSLIQNLYYFYMPFCVFV-GLTGNTMVWILIRSNRMLNKLPTNVYLLCLAAMSSIFLLSLL 130

  Fly   162 P---QELYNLWYPDMYPFTDAM-------CIMGSVLSEMAANATVLTITAFTVERYIAICHPFRQ 216
            .   :|:..:::.|:  |.|::       ||..:.|:.:...|:|..|....:||.:.:....|.
 Worm   131 VFWIEEVAYIYFYDI--FQDSLLRNSYYSCIFNTFLAHVCDFASVWLIVLVGLERLLLLYRKTRG 193

  Fly   217 HTMSKLSRAIKFIFAIWLAAFLLALPQAMQFSVVYQNEGYSCTMENDF---YAHVFAVSGFIFFG 278
            .|..| :||..||    |..|.:.....:.|......|| .|.::.:|   |..:..|...|...
 Worm   194 LTCEK-ARAQVFI----LLGFAMVFNGWILFVADMDEEG-QCDIKIEFVGMYQTMTIVETIICML 252

  Fly   279 GP----MTAICVLYVLIGVKLKR----------------------------------SRL---LQ 302
            .|    :|..|::...:...:|:                                  ||.   ::
 Worm   253 VPSVLIITCNCLVVSKLNSHIKKNPGSPAVSFNTADVVLTTQTSAPSATLKSYTRISSRFSIDVE 317

  Fly   303 SLPRRTFDANRGLNAQGRVIRMLVAVAVAFFLCWAPFHAQRLMAV-YGLN-------LINIGISR 359
            ..|::.....|..:.|  :.|.|:.|..||.|...|.:..|:.:: :|::       .|::|.  
 Worm   318 KAPKKKKKGIRYTDIQ--LTRSLLVVTWAFILLNIPNYGYRIASILFGISEQSSLMTAISLGA-- 378

  Fly   360 DAFNDYFRILDYTSGVLYFLSTCINPLLYNIMSHKFREAFKIT 402
                   .:..||.....|       .||...|.:.:...|.|
 Worm   379 -------HVFLYTHHAFLF-------YLYIFYSPQMKRRLKPT 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R1NP_731790.1 7tm_4 114..>242 CDD:304433 39/143 (27%)
7tm_1 124..388 CDD:278431 66/326 (20%)
C24B5.1NP_505381.2 7tm_GPCRs 77..404 CDD:391938 73/353 (21%)
TM helix 1 77..103 CDD:341315 8/26 (31%)
TM helix 2 111..140 CDD:341315 10/28 (36%)
TM helix 3 158..185 CDD:341315 8/26 (31%)
TM helix 4 197..217 CDD:341315 7/24 (29%)
TM helix 5 239..264 CDD:341315 5/24 (21%)
TM helix 6 329..359 CDD:341315 9/31 (29%)
TM helix 7 372..397 CDD:341315 7/40 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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