DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and Ghsr

DIOPT Version :9

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_017175002.1 Gene:Ghsr / 208188 MGIID:2441906 Length:427 Species:Mus musculus


Alignment Length:354 Identity:131/354 - (37%)
Similarity:170/354 - (48%) Gaps:54/354 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NLTSLLQGLEPEELLPTVT-------------------PMTPLSLLATLSVGYALIFIAGVLGNL 85
            |:.:.....|||   |.||                   |:.|..|||.::.....:|:.|:.|||
Mouse    63 NMWNATPSEEPE---PNVTLDLDWDASPGNDSLSDELLPLFPAPLLAGVTATCVALFVVGISGNL 124

  Fly    86 ITCIVISRNNFMHTATNFYLFNLAISD-MILLCSGMPQDLYNLWHPDNYPFSDSICILESVLSET 149
            :|.:|:||...:.|.||.||.::|.|| :|.||  ||.||..||....:.|.|.:|.|...:||:
Mouse   125 LTMLVVSRFRELRTTTNLYLSSMAFSDLLIFLC--MPLDLVRLWQYRPWNFGDLLCKLFQFVSES 187

  Fly   150 AANATVLTITAFTVERYIAICHPFRQHTMSKLSRAVKFIFAIWIAALLLALPQAIQFSVVMQGMG 214
            ...||||||||.:||||.|||.|.|...:....|....|..||..|...|.|..:...|..:. |
Mouse   188 CTYATVLTITALSVERYFAICFPLRAKVVVTKGRVKLVILVIWAVAFCSAGPIFVLVGVEHEN-G 251

  Fly   215 TSCTMKNDFFAHVFAV-SGFL---------FFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYD 269
            |.....|:..|..||| ||.|         ||..|:..:.|||.|||.||.|.|...|:.....|
Mouse   252 TDPRDTNECRATEFAVRSGLLTVMVWVSSVFFFLPVFCLTVLYSLIGRKLWRRRGDAAVGSSLRD 316

  Fly   270 VNRGISAQTRVIRMLVAVAVAFFICWAPFHAQR-LMAVYGSTSGIE----SQWFNDVFSILDYTS 329
            .|     ..:.::||..|..||.:||.|||..| |.:.......:|    ||:.|.|       |
Mouse   317 QN-----HKQTVKMLAVVVFAFILCWLPFHVGRYLFSKSFEPGSLEIAQISQYCNLV-------S 369

  Fly   330 GVLYFLSTCINPLLYNIMSHKFREA-FKV 357
            .||::||..|||:||||||.|:|.| ||:
Mouse   370 FVLFYLSAAINPILYNIMSKKYRVAVFKL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tm_1 83..344 CDD:278431 106/276 (38%)
GhsrXP_017175002.1 7tmA_GHSR 107..395 CDD:320259 116/302 (38%)
TM helix 1 108..132 CDD:320259 7/23 (30%)
TM helix 2 141..162 CDD:320259 11/22 (50%)
TM helix 3 179..201 CDD:320259 11/21 (52%)
TM helix 4 224..240 CDD:320259 5/15 (33%)
TM helix 5 272..295 CDD:320259 6/22 (27%)
TM helix 6 320..345 CDD:320259 10/24 (42%)
TM helix 7 363..388 CDD:320259 15/31 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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