DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and nmur-1

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_509515.3 Gene:nmur-1 / 183574 WormBaseID:WBGene00016747 Length:400 Species:Caenorhabditis elegans


Alignment Length:352 Identity:118/352 - (33%)
Similarity:178/352 - (50%) Gaps:41/352 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISDMILLCSGMPQDLYNLWHPDNYPFSD 137
            |..||:.||:||..||:|:.::..|.|..:.||.|||:||::.||.|:|.::...|:...:||.|
 Worm    58 YIFIFLVGVIGNTTTCLVMKKHPMMKTHASMYLMNLAVSDLVTLCVGLPFEVMMNWNQYPWPFPD 122

  Fly   138 SICILESVLSETAANATVLTITAFTVERYIAICHPFRQHTMSKLSRAVKFIFAI-WIAALLLALP 201
            .||.|:::::||.::.::|||..|.:|||:|:|||.....:....|.:..|... ||.::|.|:|
 Worm   123 YICNLKALIAETTSSVSILTILIFAIERYVAVCHPLFLMKVQPFKRNIGTIIGFTWIFSILCAMP 187

  Fly   202 QAIQFS---VVMQGMGTS----------CTMKNDF-------FAHVFAVSGFLFFGGPMTAICVL 246
            .||...   ::....||.          |.:...|       |..:|..|...||..|:..|.:|
 Worm   188 FAIHHRADYIMKSWPGTDNRIPVKSSKMCMIAVMFEPKLASTFKILFHFSAIAFFALPLFTIVIL 252

  Fly   247 YVLIGVKLKRSRLLQALPRRCYDVNRGISAQTRVIRMLVAVAVAFFICWAPFHAQRLMAVYGSTS 311
            |..|..|:..:|.:|  |.. .|:...:  |.|:..:|.|:..|||||:.||..|||:..|....
 Worm   253 YARIACKVSSNRTIQ--PGE-LDITEEL--QMRINAILCAIVSAFFICYLPFQLQRLLFFYFDNE 312

  Fly   312 GIESQWFNDVFSILDYTSGVLYFLSTCINPLLYNIMSHKFREAFKVTLARHFGLGGKNQ------ 370
            .|.: |.|   ..:.:.||.|::|:|.|||:.||:.|.:||.|||..|..:...||..:      
 Worm   313 VILT-WVN---QYMYFISGFLFYLATIINPIAYNLASSRFRRAFKDILIDYCWRGGSERYPRSSF 373

  Fly   371 -GRGLPHTYSALRRNQTGSLRLHTTDS 396
             ...|.||  .||  |..|.|:...||
 Worm   374 SKYSLAHT--PLR--QAMSNRVPILDS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 102/302 (34%)
TM helix 1 69..94 CDD:320262 10/20 (50%)
TM helix 2 101..127 CDD:320262 11/25 (44%)
TM helix 3 140..170 CDD:320262 12/29 (41%)
TM helix 4 182..204 CDD:320262 7/22 (32%)
TM helix 5 225..253 CDD:320262 9/27 (33%)
TM helix 6 275..305 CDD:320262 14/29 (48%)
TM helix 7 323..348 CDD:320262 10/24 (42%)
nmur-1NP_509515.3 7tmA_NTSR-like 52..352 CDD:320110 102/302 (34%)
TM helix 1 52..79 CDD:320110 10/20 (50%)
TM helix 2 86..112 CDD:320110 11/25 (44%)
TM helix 3 125..155 CDD:320110 12/29 (41%)
TM helix 4 168..190 CDD:320110 7/21 (33%)
TM helix 5 230..259 CDD:320110 10/28 (36%)
TM helix 6 276..306 CDD:320110 14/31 (45%)
TM helix 7 320..345 CDD:320110 10/24 (42%)

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