DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and trhr-1

DIOPT Version :9

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_491990.1 Gene:trhr-1 / 183056 WormBaseID:WBGene00016265 Length:395 Species:Caenorhabditis elegans


Alignment Length:400 Identity:123/400 - (30%)
Similarity:193/400 - (48%) Gaps:63/400 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PEELLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISDMI 114
            ||||..|:.|:....:..||:..::.|.:.||||||:...|:.:...|.|.||.||.:||.||.:
 Worm    16 PEELDGTIAPIGTQPMDITLAFVFSAISVIGVLGNLLVITVVLKVRGMKTPTNCYLVSLAASDTL 80

  Fly   115 LLCSGMPQDLYNLWHP-DNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFRQHTM 178
            ...:.||.::..|..| |:|.|....|:|.:.|...|.|.:.|:|.|||:|||..||:|::..||
 Worm    81 FFFASMPHEMMYLLGPNDHYLFGSLGCVLLTYLPYLAMNTSSLSILAFTIERYYGICNPYKARTM 145

  Fly   179 SKLSRAVKFIFAIWIAALLLALPQAIQFSVVMQGMGTSCTMKNDFFAH----VFAVSGFLFFGGP 239
            ..:.||...|..|||.::|.........:::...:||||:.:.:..:|    ||.:...|::..|
 Worm   146 CTVKRATCIICGIWIFSMLYHSYWLFLATLIKDDIGTSCSFRLERNSHAYKIVFLLDFVLWYVLP 210

  Fly   240 MTAICVLYVLIGV-------KLKRSRLLQALPRRCYDVNRGISAQT------------------- 278
            :....::|..||:       |:|:| :...:|.... |.:..::.|                   
 Worm   211 IMCDIIIYAKIGITLSQCGDKIKKS-VKPKIPNEVI-VEKSKTSSTSMGHYSGRDSHISGKRNSA 273

  Fly   279 ----RVIRMLVAVAVAFFICWAPFHAQRLMAVYGS-TSGIESQWFNDVFSILDYTSGVLYFLSTC 338
                :|::||..|...|.:||.|:   |.|.||.| .|..:..|..|.:..|..|   |.|::..
 Worm   274 KGRNQVVKMLAIVVAVFAVCWLPY---RGMVVYNSFVSDPKYSWSPDWYINLSKT---LVFINCA 332

  Fly   339 INPLLYNIMSHKFREAFKVTLARHFGLGGKNQGRGLPHTYSALRRNQTGSLRLHTTDSVRTT--- 400
            |||:|||:||.:||.||:..|::.     ||.|      :.:...||..  ||:|.|.:.:.   
 Worm   333 INPILYNLMSARFRAAFRSLLSKR-----KNSG------FKSTALNQRH--RLNTMDIMSSAEPK 384

  Fly   401 ---MTSMATT 407
               :||||.|
 Worm   385 SPLITSMAGT 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tm_1 83..344 CDD:278431 87/296 (29%)
trhr-1NP_491990.1 7tmA_TRH-R 33..349 CDD:320126 100/323 (31%)
TM helix 1 35..59 CDD:320126 9/23 (39%)
TM helix 2 68..90 CDD:320126 9/21 (43%)
TM helix 3 108..130 CDD:320126 8/21 (38%)
TM helix 4 153..169 CDD:320126 5/15 (33%)
TM helix 5 196..219 CDD:320126 4/22 (18%)
TM helix 6 277..302 CDD:320126 10/27 (37%)
TM helix 7 317..342 CDD:320126 11/27 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I2906
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.960

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