DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK2-R2 and dop-2

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001256126.1 Gene:dop-2 / 179347 WormBaseID:WBGene00001053 Length:849 Species:Caenorhabditis elegans


Alignment Length:509 Identity:106/509 - (20%)
Similarity:180/509 - (35%) Gaps:145/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LPTVTPMTPLSLLAT-LSVGYA-----LIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISD 112
            |.|:| .||.:::.: :.:.||     :|.:..:||||:..|.:.|...:.:|.||.:..||::|
 Worm    20 LSTIT-QTPSTIVGSGIPLNYAGLSLIVIPLITLLGNLLVIISVLRYRALQSAINFLILGLAVAD 83

  Fly   113 MILLCSGMPQDLY-----NLWHPDN-----YPFSDSICILESVLSETAANATVLTITAFTVERYI 167
            :::....||..:|     ..|:..|     |..||..|          :.|::|.:...:.:||.
 Worm    84 LLVAIIVMPYAVYVYVTNGDWYLGNLMCDIYMASDVCC----------STASILLLAVISFDRYR 138

  Fly   168 AICHPFRQHTMSK-LSRAVKFIFAIWIAALLLALPQAIQFSVVMQGMGTS---CTMKNDFFAHVF 228
            |:..|.:....|: :.|....|..||:.:|.||.|..  |.|.::....:   |...|..|:   
 Worm   139 AVSLPIQYSRQSQNVKRVWTLIAVIWLVSLTLASPMV--FGVNVRPPDANPYECRFYNAEFS--- 198

  Fly   229 AVSGFLFFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYDVNRGISA----------QTRVIRM 283
            .:|..:.|..|...:..:|:.|.:.||:......:.|....:..|::.          :....|:
 Worm   199 ILSSMISFVIPCFLVLFVYIRIIIALKKREKAAKMRREKNTIAHGLTMRPDTGEEQVDEEAAGRI 263

  Fly   284 LVAVAVAFFICWAPFHAQRLMAVYGSTSGIE----SQWFNDVFSILDYTSGVLYFLSTCINPLLY 344
            :....|...:...|...:|:.........||    .:|..|...::|         ..|      
 Worm   264 VAGPVVNVMMAALPSMTRRMRQFERHRRAIELAGDEEWEEDELDVMD---------ECC------ 313

  Fly   345 NIMSHKFREAFKVTLARHFGLGG-----------KNQGRGL-----PHTYSALRR---------- 383
                                 ||           .:.|:|:     |.|.|.|||          
 Worm   314 ---------------------GGDDAGDDDDDYHADNGQGVVEASAPRTTSMLRRIINAASVGTA 357

  Fly   384 NQT-------GSLRLHTTDSVRTTMTSMA-----TTTTGLNGSANGS------------GNGTTT 424
            |.|       ..:......::.||..|.:     ||||.....|:|.            ||.:|.
 Worm   358 NSTAQSVASASGMPAFFAQNISTTSPSSSSCARTTTTTSAIPKASGDLPLPMLLNEREFGNSSTP 422

  Fly   425 GQSV-----RLNRVSLDSVQMQGQNRSRQDLFDNPRRMLQTQISQLSSVGDAHS 473
            ..|:     .:|.::.|.|.......||:..:.:..   |...||.|| ||..|
 Worm   423 RSSLESLSENVNVITNDFVSENCTTFSRRSSYADDS---QPTSSQTSS-GDGRS 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 63/318 (20%)
TM helix 1 69..94 CDD:320262 8/29 (28%)
TM helix 2 101..127 CDD:320262 8/30 (27%)
TM helix 3 140..170 CDD:320262 6/29 (21%)
TM helix 4 182..204 CDD:320262 8/21 (38%)
TM helix 5 225..253 CDD:320262 5/27 (19%)
TM helix 6 275..305 CDD:320262 4/39 (10%)
TM helix 7 323..348 CDD:320262 2/24 (8%)
dop-2NP_001256126.1 7tmA_D2-like_dopamine_R 38..>233 CDD:320181 51/209 (24%)
TM helix 1 39..65 CDD:320181 8/25 (32%)
TM helix 2 72..98 CDD:320181 8/25 (32%)
TM helix 3 111..141 CDD:320181 9/39 (23%)
TM helix 4 154..177 CDD:320181 8/24 (33%)
TM helix 5 194..223 CDD:320181 7/31 (23%)
7tm_GPCRs <745..828 CDD:475119
TM helix 6 757..779 CDD:410628
TM helix 7 796..821 CDD:410628
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.