DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK2-R2 and nmur1

DIOPT Version :9

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_002937396.1 Gene:nmur1 / 100498264 XenbaseID:XB-GENE-940641 Length:430 Species:Xenopus tropicalis


Alignment Length:401 Identity:132/401 - (32%)
Similarity:203/401 - (50%) Gaps:72/401 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EELL------PTVTPMTPLSLLATLSVGYALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLA 109
            ||||      ...|..||:.::      |..||..|.:||.:|||||.::..|.|.||:||.:||
 Frog    51 EELLFKYLGPRRSTYFTPICII------YLFIFAVGAVGNTLTCIVIIKHKIMRTPTNYYLLSLA 109

  Fly   110 ISDMILLCSGMPQDLYNLWHPDNYP--FSDSICILESVLSETAANATVLTITAFTVERYIAICHP 172
            |||:::|..|||.:||.||  .|||  |..|.|..:::|.||...|::|.:||.:||||||:.||
 Frog   110 ISDLLVLLLGMPLELYELW--SNYPFVFGQSGCSFKTLLFETVCFASILNVTALSVERYIAVVHP 172

  Fly   173 FRQHTMSKLSRAVKFIFAIWIAALLLALPQAIQFSVV---MQGMG-----TSCTMKNDFFAH--V 227
            .|...:...:.|.:.||::|:.::|.::|......::   :.|:|     .:||:....:.:  :
 Frog   173 LRAKYVVTRNHAKRVIFSVWVISILCSIPNTSLNGILHLRVLGIGIVPGSATCTVVRPRWIYNLI 237

  Fly   228 FAVSGFLFFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYDVNRGIS---------AQTRVIRM 283
            ..::...||..||..|.|||:|||::||:.::||.|..:......|..         .:.:|.:|
 Frog   238 IQITTIFFFFLPMGTISVLYLLIGLQLKKEKMLQVLETKSGKEGDGYQNVRLQQEKIRRRQVTKM 302

  Fly   284 LVAVAVAFFICWAPFHAQRLMAVYGSTSGIESQW---FNDVFSILDYTSGVLYFLSTCINPLLYN 345
            |..:.|.|.|||||||.:|||..:      .:.|   .:.:||.:...||||::||:.:||:|||
 Frog   303 LFILVVVFGICWAPFHTERLMWSF------INDWTEVMHQIFSFVHVISGVLFYLSSVVNPILYN 361

  Fly   346 IMSHKFREAFKVTLARHFGLGGKNQGRGLPHTYSALRRNQTGSLRLHTTDSVRTTMTSMATTTTG 410
            ::|.:|||.||..:...                   |..:.||         |.:..|:...||.
 Frog   362 LLSTRFREMFKEVMCHG-------------------RTKRLGS---------RRSSPSVTRVTTR 398

  Fly   411 LNGSANGSGNG 421
            .....|..|||
 Frog   399 STVCENVPGNG 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tm_1 83..344 CDD:278431 101/284 (36%)
nmur1XP_002937396.1 7tmA_NMU-R1 67..371 CDD:320480 114/317 (36%)
TM helix 1 67..94 CDD:320480 13/32 (41%)
TM helix 2 101..127 CDD:320480 15/25 (60%)
TM helix 3 140..170 CDD:320480 14/29 (48%)
TM helix 4 182..204 CDD:320480 6/21 (29%)
TM helix 5 234..263 CDD:320480 11/28 (39%)
TM helix 6 294..324 CDD:320480 14/29 (48%)
TM helix 7 339..364 CDD:320480 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 183 1.000 Domainoid score I3366
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3483
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9540
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X673
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.