DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK2-R2 and ghsr

DIOPT Version :9

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_002931618.1 Gene:ghsr / 100497774 XenbaseID:XB-GENE-484475 Length:359 Species:Xenopus tropicalis


Alignment Length:348 Identity:120/348 - (34%)
Similarity:175/348 - (50%) Gaps:40/348 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NEKFLLNLTQVLNISADNLTSLLQGLEPEELLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLIT 87
            :|.::.|.|.....|::|.:      .||:  |..  :.|:.:|..::|...|:||.|:.||::|
 Frog     3 SEIYIQNRTMDYYYSSNNYS------WPED--PVF--LFPVPVLTGITVTCILLFIIGISGNVMT 57

  Fly    88 CIVISRNNFMHTATNFYLFNLAISD-MILLCSGMPQDLYNLWHPDNYPFSDSICILESVLSETAA 151
            .:|:|:...|.|.||.||.::|.|| :|.||  ||.|||.||....:.|..|:|.|...:||...
 Frog    58 MLVVSKYKDMRTTTNLYLSSMAFSDLLIFLC--MPLDLYRLWQYRPWNFGSSLCKLFQFVSECCT 120

  Fly   152 NATVLTITAFTVERYIAICHPFRQHTMSKLSRAVKFIFAIWIAALLLALPQAIQFSVVMQGMGTS 216
            .:|:|.|||.:||||.|||.|.:...:....|....|..:|..:.:.|.|..:...|..:. ||:
 Frog   121 YSTILNITALSVERYFAICFPLKAKVVITKGRVKLVISVLWAVSFVSAGPIFVLVGVEHEN-GTN 184

  Fly   217 CTMKNDFFAHVFAV-SGFL---------FFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYDVN 271
            ....|:..|..:|: ||.|         ||..|:..:.|||.|||.||.|.:.....|..  .:.
 Frog   185 PLDTNECKATEYAIKSGLLTIMVWTSSIFFFLPVFCLTVLYTLIGRKLWRRKRETIGPHT--SIR 247

  Fly   272 RGISAQTRVIRMLVAVAVAFFICWAPFHAQRLMAVYGSTSG-----IESQWFNDVFSILDYTSGV 331
            ...:.||  ::||..|..||.:||.|||..|.:......:|     :.||:.|.|       |.|
 Frog   248 DKHNKQT--VKMLAVVVFAFILCWLPFHVARYLFSKSFEAGSLEIALISQYCNLV-------SFV 303

  Fly   332 LYFLSTCINPLLYNIMSHKFREA 354
            |::||..|||:||||||.|:|.|
 Frog   304 LFYLSAAINPILYNIMSKKYRVA 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tm_1 83..344 CDD:278431 96/276 (35%)
ghsrXP_002931618.1 7tm_4 48..334 CDD:304433 107/293 (37%)
7tm_1 53..316 CDD:278431 96/276 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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