DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32473 and Lta4h

DIOPT Version :9

Sequence 1:NP_731787.1 Gene:CG32473 / 41636 FlyBaseID:FBgn0052473 Length:1025 Species:Drosophila melanogaster
Sequence 2:NP_001025202.1 Gene:Lta4h / 299732 RGDID:1311333 Length:611 Species:Rattus norvegicus


Alignment Length:614 Identity:151/614 - (24%)
Similarity:232/614 - (37%) Gaps:134/614 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LHLR--PDLERKNYSGNISISLQVLEP-IAFIPVHVKQLNVSTV-----EVK-RLDES----GAP 206
            ||||  .|..|:..:|..::::|..|. :..:.:..|.|.:..|     ||| .|.||    |:|
  Rat    22 LHLRCSVDFARRALTGTAALTVQSQEDNLRSLTLDTKDLTIEKVVINGQEVKYTLGESQGYKGSP 86

  Fly   207 LKDITPTLTFAHPEFEYWVTEFEQPLEAGNYSLLLNFTGSLVDRITGMYQSSYLDKLKNRSRSII 271
            ::...|.....:.|     ...|...|....|..|.:   |....|...|..||           
  Rat    87 MEISLPIALSKNQE-----VVIEISFETSPKSSALQW---LTPEQTSGKQHPYL----------- 132

  Fly   272 STKFEPTYARQAFPCFDEPALKAQFTITVARPSGDEYHVLSNMPVASEYVDGDITE--------V 328
            .::.:..:.|...||.|.|::|..:|..|:.|.       ..:.:.|...||:..:        .
  Rat   133 FSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPK-------ELVALMSAIRDGEAPDPEDPSRKIY 190

  Fly   329 TFAETVPMSTYLAAFVVSDFQYKETTVEGTSIALK--VYAPPAQVEKTQYALDTAAGVMAYYINY 391
            .|.:.||:..||.|.||.       .:|...|..:  |::...||||:.|....... |......
  Rat   191 RFNQRVPIPCYLIALVVG-------ALESRQIGPRTLVWSEKEQVEKSAYEFSETES-MLKIAED 247

  Fly   392 FNVSYALPKLDLVAI-PDFVSGAMENWGLVTFRETALLYDESTSSSVNKQRVAIVVAHELAHQWF 455
            ....|...:.||:.: |.|..|.|||..|.....|.|..|:|.|:         |:|||::|.|.
  Rat   248 LGGPYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSN---------VIAHEISHSWT 303

  Fly   456 GNLVTMNWWNDLWLNEGFASFLEYK------GVKQMH----PEW-DMDNQFVIEELHPVLTIDAT 509
            |||||...|:..|||||...:||..      |.|..|    ..| ::.|           ||...
  Rat   304 GNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFHALGGWGELQN-----------TIKTF 357

  Fly   510 LASHPIVKSIESPAEITE--YFDTITYSKGAALVRMLENLV-GEEKLRNATTRYLVRHIYSTATT 571
            ..|||..|.:....::..  .:.:|.|.||.||:..||.|: |.|........|:.:..|.:.||
  Rat   358 GESHPFTKLVVDLKDVDPDVAYSSIPYEKGFALLFYLEQLLGGPEVFLGFLKAYVEKFSYQSVTT 422

  Fly   572 EDYLTAVEEEEGLEFD-VKQI-MQTWTEQMGLPVV----EVEKSGSTYKLTQKRFLANEDDYAAE 630
            :|:.:.:......:.| :.|: ...|....|||.|    :|..:.:...|:|:...|.|:|    
  Rat   423 DDWKSFLYAHFKDKVDLLNQVDWNAWLYAPGLPPVKPNYDVTLTNACIALSQRWVTAKEED---- 483

  Fly   631 AEASSFNYRWSIPITYTSSINSEVQSLIFNHNDNEATITLPEEA----SWIK-----INTNQVGY 686
                            .:|.:.|....:.:|..||....:.::|    ..||     .|.|.:..
  Rat   484 ----------------LNSFSIEDLKDLSSHQLNEFLAQVLQKAPLPLGHIKRMQEVYNFNAINN 532

  Fly   687 YRVNYG------SEQWAELIS-ALKNSRE 708
            ..:.:.      ..:|.|.|. |||.:.|
  Rat   533 SEIRFRWLRLCIQSKWEEAIPLALKMATE 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32473NP_731787.1 Peptidase_M1 143..537 CDD:279741 107/418 (26%)
M1_APN_2 151..602 CDD:189008 125/486 (26%)
ERAP1_C 677..992 CDD:288671 11/44 (25%)
Lta4hNP_001025202.1 leuko_A4_hydro 6..608 CDD:274120 151/614 (25%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 135..137 0/1 (0%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 267..272 1/4 (25%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 564..566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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