DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8774 and Rnpep

DIOPT Version :10

Sequence 1:NP_650274.2 Gene:CG8774 / 41635 FlyBaseID:FBgn0038136 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:532 Identity:125/532 - (23%)
Similarity:205/532 - (38%) Gaps:113/532 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 AGATRTISTTKFEPTYARQAFPCFDEPAMKATFAITVVHPSGSYHAVSNMQQTESNYLGDYTEAI 242
            ||..:....|:.:....|..|||||.||:|.|::..|..|.| :.||.:....|......:   .
  Rat   159 AGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCTYSALVEVPDG-FTAVMSASTWERRGPNKF---F 219

  Fly   243 FETSVSMSTYLVCIIVSDFAS----------------QSTTVKANGIGEDFSMQAYATSHQINKV 291
            |:.:..:.:||:.:.:.|.||                ::...:.||:.|:|    .||..::   
  Rat   220 FQMNQPIPSYLIALAIGDLASAEVGPRSRVWAEPCLIEAAKEEYNGVIEEF----LATGEKL--- 277

  Fly   292 EFALEFGQAVTEYYIQYYKVPYPLTKLDMAAI-PDFASGAMEHWGLVTYRETALLYDPSYSSTAN 355
                 ||             ||...:.|:..: |.|..|.||: ..:|:....||        |.
  Rat   278 -----FG-------------PYVWGRYDLLFMPPSFPFGGMEN-PCLTFVTPCLL--------AG 315

  Fly   356 KQSIAGTLAHEIAHQWFGNLVTMKWWNDLWLNEGFARYMQ-----------YKGVNAVHPDWGML 409
            .:|:|..:.|||:|.|||||||...|.:.||||||..|.|           |..:.|. ....:|
  Rat   316 DRSLADVIIHEISHSWFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAA-TGRALL 379

  Fly   410 EQFQIVALQPVLLYDAKLSSHPIVQKVESPDEITAIFDTISYEKGGSVIRMLETLVG-AEKFEEA 473
            .|...|:.:...|...::...|.|    .||:   .::...||||...:..|..||| .|:|::.
  Rat   380 RQHMDVSGEENPLNKLRVKIEPGV----DPDD---TYNETPYEKGYCFVSYLAHLVGDQEQFDKF 437

  Fly   474 VTNYLVKHQFNNTVTDDFLTEVEAVVTDLDIKKL-------MLTWTEQMGY-PVLNVSKVADGSF 530
            :..|:.:.:|.:.:.:|||........:|..|.:       ...|....|: |.|......|...
  Rat   438 LKAYVDEFKFQSILAEDFLEFYLEYFPELKKKGVDSIPGFEFNRWLNTPGWPPYLPDLSPGDSLM 502

  Fly   531 KVTQQRFLSNPASYEEAPSDSAYGYK-W-SVPITWFADDGSENSFIYDYDVDSVGIAVPSEVQWI 593
            |..::......||..:..:..|.... | :..:.:|.|...:.|.:...:|..:|...|      
  Rat   503 KPAEELAELWAASEPDMQAIEAVAISTWKTYQLVYFLDKILQKSPLPPGNVKKLGETYP------ 561

  Fly   594 KLNVNQTGYYRVNYEESLWALLIQQLTTSPARFEIADRGHLLNDAFALADANQLSYKIPL----- 653
            |::..|....|:.     |..:|.:.......:::.|        |..:...| .|.:||     
  Rat   562 KISNAQNAELRLR-----WGQIILKNDHQEEFWKVKD--------FLQSQGKQ-KYTLPLYHAMM 612

  Fly   654 ---DMTAYLAQE 662
               :|...||:|
  Rat   613 GGSEMARTLAKE 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8774NP_650274.2 M1_APN-Q_like 75..513 CDD:341064 95/370 (26%)
ERAP1_C 592..912 CDD:463368 15/79 (19%)
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 95/370 (26%)
Leuk-A4-hydro_C 530..645 CDD:462686 22/115 (19%)

Return to query results.
Submit another query.