DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8774 and Lta4h

DIOPT Version :9

Sequence 1:NP_650274.2 Gene:CG8774 / 41635 FlyBaseID:FBgn0038136 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_001025202.1 Gene:Lta4h / 299732 RGDID:1311333 Length:611 Species:Rattus norvegicus


Alignment Length:831 Identity:164/831 - (19%)
Similarity:278/831 - (33%) Gaps:280/831 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DTTDYRLPTNLVPT-HYELYWHPDLETGNFTGQQRISIKVVEATNQIILHSYLLDITSV----YV 121
            ||.....|.::..| |..|....|......||...::::..|..    |.|..||...:    .|
  Rat     6 DTCSLASPASVCRTQHLHLRCSVDFARRALTGTAALTVQSQEDN----LRSLTLDTKDLTIEKVV 66

  Fly   122 LNREVEKFELEEERQF----LIITLTEELAVDASITLGIIFGGQMKDKLVGLYSSTYLNEAGATR 182
            :|.:..|:.|.|.:.:    :.|:|...|:.:..:.:.|.|  :...|...|...|....:|...
  Rat    67 INGQEVKYTLGESQGYKGSPMEISLPIALSKNQEVVIEISF--ETSPKSSALQWLTPEQTSGKQH 129

  Fly   183 TISTTKFEPTYARQAFPCFDEPAMKATFAITVVHPSGSYHAVSNMQQTESNYLGDYTEAI--FET 245
            ....::.:..:.|...||.|.|::|.|:...|..|......:|.::..|:....|.:..|  |..
  Rat   130 PYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGEAPDPEDPSRKIYRFNQ 194

  Fly   246 SVSMSTYLVCIIVSDFASQSTTVKANGIG---------EDFSMQAYATSHQINKVEFALEFGQAV 301
            .|.:..||:.::|....|:.       ||         |.....||..|...:.::.|.:.|.  
  Rat   195 RVPIPCYLIALVVGALESRQ-------IGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-- 250

  Fly   302 TEYYIQYYKVPYPLTKLDMAAI-PDFASGAMEHWGLVTYRETALLYDPSYSSTANKQSIAGTLAH 365
                      ||...:.|:..: |.|..|.||:..|.....|.|         |..:|::..:||
  Rat   251 ----------PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLL---------AGDKSLSNVIAH 296

  Fly   366 EIAHQWFGNLVTMKWWNDLWLNEGFARYMQ-----------YKGVNAVHPDWGMLEQFQIVALQP 419
            ||:|.|.|||||.|.|:..|||||...|::           ::..:|: ..||.|:       ..
  Rat   297 EISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFHAL-GGWGELQ-------NT 353

  Fly   420 VLLYDAKLSSHPIVQ-----KVESPDEITAIFDTISYEKGGSVIRMLETLVGA-EKFEEAVTNYL 478
            :..:.   .|||..:     |...||   ..:.:|.||||.:::..||.|:|. |.|...:..|:
  Rat   354 IKTFG---ESHPFTKLVVDLKDVDPD---VAYSSIPYEKGFALLFYLEQLLGGPEVFLGFLKAYV 412

  Fly   479 VKHQFNNTVTDDFLTEVEAVVTD-LDIKKLMLTWTEQMGYPVLNVSKVADGSFKVTQQRFLSNPA 542
            .|..:.:..|||:.:.:.|...| :|:               ||                     
  Rat   413 EKFSYQSVTTDDWKSFLYAHFKDKVDL---------------LN--------------------- 441

  Fly   543 SYEEAPSDSAYGYKWSVPITWFADDGSENSFIY---------DYDVDSVGIAVPSEVQWIKLNVN 598
                             .:.|       |:::|         :|||......:....:|:...  
  Rat   442 -----------------QVDW-------NAWLYAPGLPPVKPNYDVTLTNACIALSQRWVTAK-- 480

  Fly   599 QTGYYRVNYEESLWALLIQQLTTSPARFEIADRGHLLNDAFALADANQLSYKIPLDMTAYLAQER 663
                     ||.|.:..|:.|....:        |.||:..|     |:..|.||.:        
  Rat   481 ---------EEDLNSFSIEDLKDLSS--------HQLNEFLA-----QVLQKAPLPL-------- 515

  Fly   664 DFVPWYVASNKLRSLHRSLMFSEGYVSYLTYARSLIAGVYEEVGWTVDADNHLKNRLRVSILTAA 728
                                   |::..:           :|| :..:|.|:.:.|.|...|   
  Rat   516 -----------------------GHIKRM-----------QEV-YNFNAINNSEIRFRWLRL--- 542

  Fly   729 CALGVPDCLQQASERFSTFLENPTTRPSPDLREIVYYYGMQQSTSQSSWDQLFQLFVAETDASEK 793
                   |:                                    ||.|::...|         .
  Rat   543 -------CI------------------------------------QSKWEEAIPL---------A 555

  Fly   794 LKLMYGLSGVRNSQYLFDFLA--QASSDESIVRSQDYFTCVQYIAANPVGE 842
            ||:......::.::.||..||  ..|.|:::...|::..|:..:.|..||:
  Rat   556 LKMATEQGRMKFTRPLFKDLAAFDKSHDQAVRTYQEHKACMHPVTAMLVGK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8774NP_650274.2 Peptidase_M1 67..454 CDD:279741 98/423 (23%)
M1_APN_2 75..518 CDD:189008 113/481 (23%)
ERAP1_C 593..910 CDD:288671 39/252 (15%)
Lta4hNP_001025202.1 leuko_A4_hydro 6..608 CDD:274120 164/831 (20%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 135..137 0/1 (0%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 267..272 1/4 (25%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 564..566 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.