DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8774 and ltah-1.1

DIOPT Version :9

Sequence 1:NP_650274.2 Gene:CG8774 / 41635 FlyBaseID:FBgn0038136 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_001023056.1 Gene:ltah-1.1 / 178176 WormBaseID:WBGene00016589 Length:609 Species:Caenorhabditis elegans


Alignment Length:635 Identity:163/635 - (25%)
Similarity:270/635 - (42%) Gaps:140/635 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 THYELYWHPDLETGNFTGQQRISIKVVEATNQIILHSYLLDITSVYV-LNREVEK--FELEEER- 135
            :||.|.|..|.|..:..|...|::.|.:.|.:|:|.:..|.:.||.: ||.|.:|  |.||:.: 
 Worm    21 SHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTLEDNQA 85

  Fly   136 --QFLIITLTEELAVDASITLGIIFGGQMKDKLVGLYSSTYLNEAGATRTIS---TTKFEPTY-- 193
              |.|:|| ||.|.......|.|            .|.|:  |.|.|.:.::   ||.....|  
 Worm    86 LGQKLVIT-TESLKSGDRPVLEI------------KYESS--NNAAALQFLTAEQTTDRVAPYLF 135

  Fly   194 -------ARQAFPCFDEPAMKATFAITVVHPSGSYHAVSNM-QQTESNYLGDYTEAIFETSVSMS 250
                   ||...||.|.|::|:|:...|..|.|....:|.: |.:..:..|..|...|:..||:.
 Worm   136 SQCQAINARSIVPCMDTPSVKSTYEAEVCVPIGLTCLMSAIGQGSTPSECGKRTIFSFKQPVSIP 200

  Fly   251 TYLVCIIVSDFASQSTTVKANGIGEDFSMQAYATSHQINKVEFALEFGQAVTEYYIQYYKVPYPL 315
            :||:.|:|.....:..:.:.....|  ..||.|:.::..:.|..|:..:.|..        ||..
 Worm   201 SYLLAIVVGHLERKEISERCAVWAE--PSQAEASFYEFAETEKILKVAEDVAG--------PYVW 255

  Fly   316 TKLDMAAIP-DFASGAMEHWGLVTYRETALLYDPSYSSTANKQSIAGTLAHEIAHQWFGNLVTMK 379
            .:.|:..:| .|..|.||:..|.....|.|         |..:|:...:||||:|.|.|||||..
 Worm   256 GRYDLVVLPATFPFGGMENPCLTFITPTLL---------AGDRSLVNVIAHEISHSWTGNLVTNF 311

  Fly   380 WWNDLWLNEGFARYMQYKGVNAVHPD-WGMLE-QFQ---------IVALQPVLLYDAKLSSHPIV 433
            .|...||||||..:::.|    :|.. :|.|| ||:         :..:..|...|.:.:.  :|
 Worm   312 SWEHFWLNEGFTVFLERK----IHGKMYGELERQFESESGYEEALVRTVNDVFGPDHEYTK--LV 370

  Fly   434 QKVESPDEITAIFDTISYEKGGSVIRMLETLVG-AEKFEEAVTNYLVKHQFNNTVTDDFLTEVEA 497
            |.:.:.|...| |.::.||||.:::..:|..:| ..:||:.:.:|:.|:.:....|:::...:..
 Worm   371 QNLGNADPDDA-FSSVPYEKGSALLFTIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYD 434

  Fly   498 VVTDLDIKKLML------TWTEQMGYPVLNVSKVADGSFKVTQQRFLSNPASYEEAPSDSAYGYK 556
            ..||   ||::|      .|..:.|.|              .:.::.|.|.   :|..|.|  .|
 Worm   435 SFTD---KKVILDNIDWNLWLHKAGLP--------------PKPKYDSTPM---QACKDLA--AK 477

  Fly   557 WSVPITWFADDGSE---NSFIYDYDVDSVGIAVPSEVQWIKLNVNQTGY----------YRVNYE 608
            |:.       :|||   :..::....:|..:||...|:     ||:|.:          |:::..
 Worm   478 WTT-------EGSEAPTDGEVFAKMSNSQKLAVLDAVR-----VNKTMFGDRMPALTATYKLDQA 530

  Fly   609 ESL-----WALLIQQLTTSPARFEIADRGHLLNDAFALADANQLSYKIPL 653
            ::.     |.:|..:...||    |.|    .:.||||| ..::.|..|:
 Worm   531 KNAELKFSWLMLGLETKWSP----IVD----ASLAFALA-VGRMKYCKPI 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8774NP_650274.2 Peptidase_M1 67..454 CDD:279741 115/409 (28%)
M1_APN_2 75..518 CDD:189008 131/480 (27%)
ERAP1_C 593..910 CDD:288671 17/76 (22%)
ltah-1.1NP_001023056.1 M1_LTA4H 8..453 CDD:189006 130/475 (27%)
Leuk-A4-hydro_C 468..608 CDD:312599 29/130 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.