DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8773 and APM1

DIOPT Version :10

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_195035.2 Gene:APM1 / 829446 AraportID:AT4G33090 Length:879 Species:Arabidopsis thaliana


Alignment Length:906 Identity:305/906 - (33%)
Similarity:473/906 - (52%) Gaps:88/906 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RLPGTLKPTHYDLYLFPNIETGEFSGQETITITVEEATDQIVLHSLNLNISSVSIMNT---GSDT 183
            |||....|..|||.|.|::....|:|...|.:.:...|..|||::.:|:::..|:..|   .|..
plant     9 RLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVNDASVSFTPPSSSKA 73

  Fly   184 LEILETTVDAVREFLIFQLNEPLTKGRTVRLHIGFEGSMANKIVGLYSSSYVKEDETRKWIATSK 248
            |...:..:....|.|:.:..|.|..|..| |.:||.|.:.:|:.|.|.|:|....| :|.:|.::
plant    74 LAAPKVVLFEEDEILVLEFGEILPHGVGV-LKLGFNGVLNDKMKGFYRSTYEHNGE-KKNMAVTQ 136

  Fly   249 FEPTYARQAFPCFDEPALKAEFTITLVHPSGEDYHALSNMNVDSSVSQGAFQEVTFAKSVPMSTY 313
            |||..||:.|||:||||.||.|.|||..|:  |..|||||.:......|..:.|::.:|..||||
plant   137 FEPADARRCFPCWDEPACKATFKITLEVPT--DLVALSNMPIMEEKVNGNLKIVSYQESPIMSTY 199

  Fly   314 LACFIVSDFAYKQVSIDTKGIGETFSMSVYATPEQLDKVDLAVTIGKGVIEYYIDYFQIAYPLPK 378
            |...:|..|.|.:   |....|  ..:.||....:.|:...|:.:|...::.:.:||.:.|||||
plant   200 LVAIVVGLFDYVE---DHTSDG--IKVRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPLPK 259

  Fly   379 LDMAAIPDFVSGAMEHWGLVTYRETSLLYDEATSSATNKQRIASVIAHEFAHMWFGNLVTMNWWN 443
            :||.|||||.:||||::||||||||:|||||..|:|:||||:|:|:|||.||.||||||||.||.
plant   260 MDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEWWT 324

  Fly   444 DLWLNEGFASFVEYLGVDAVYPEWKMRDQFTVSTLHSVLTLDGTLGSHPIIQTVENPDQITEIFD 508
            .||||||||::|.||..|:::||||:..||...:... |.|||...||||...|.:..:|.||||
plant   325 HLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEG-LRLDGLEESHPIEVEVNHAAEIDEIFD 388

  Fly   509 TITYSKGSSLVRMLEDFLGETTFRQAVTNYLNEYKYSTAETGNFFTEIDKLELGYNVTEIMLTWT 573
            .|:|.||:|::|||:.:||...|::::..|:..:.||.|:|.:.:..:: ...|..|.::|.:||
plant   389 AISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALE-AGSGEPVNKLMSSWT 452

  Fly   574 VQMGLPVVTIEKVSDTEYKLTQKRFLSNPNDYDADHEPSEFNYRWSIPIT-----YFTSSDSVVQ 633
            .|.|.|||: .|:.|.:.:|.|.||||:.:       |.|  .:|.:|:|     |....:.:::
plant   453 KQKGYPVVS-AKIKDGKLELEQSRFLSSGS-------PGE--GQWIVPVTLCCGSYEKRKNFLLE 507

  Fly   634 RLWFYHDQSEI--------TVTVPAAVEWIKFNADQVGYYRVNYDTDLWNDLADQLVVQPSAFGS 690
            .....:|..|:        :..:.....|||.|.||.|:|||.||..|...|.:  ..:..:..|
plant   508 SKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRN--ATESQSLTS 570

  Fly   691 VDRAHLLNDAFALADSTQLPYATAFELTRYLDKETDYVPWSVAASRLTSLKRTLYYTSTYAK--- 752
            :||..:|:|:|||..:.|...|:...|.....||.||    ...|.|.::...:......|.   
plant   571 IDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDY----TVLSNLIAISYKVVKIGADANQEL 631

  Fly   753 ---YKKYATALIEPIYTALTW--TVGEDHLDNRLRVTALSAACSLGLESCLTEAGEQFNAWLAKP 812
               .|.:...:.:.....|.|  ..||.|||..||...|:|....|.:..|.||..:|:|:||  
plant   632 MSGIKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLA-- 694

  Fly   813 EDRP----KADVRETVYYYGIQSVGSQE--DWDAVWELFVNESDAS-EKSKLMYGLSAIQIPWIL 870
             ||.    ..|:|...|...:|.....:  .::::..:: .|:|.| ||::::..|::...|.|:
plant   695 -DRNTPLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVY-RETDLSQEKTRILGSLASCPDPTIV 757

  Fly   871 QRYIDLAWNEEYVRGQDYFTCLTYISANPVGESLVWDYVRENWQRLVDRFGLNERYLGN------ 929
            |..::...::| ||.||....|:.:|..  |..:.|.:::|.|:           |:||      
plant   758 QDVLNFVLSDE-VRNQDALYGLSGVSWE--GREVAWKWLQEKWE-----------YIGNTWGSGF 808

  Fly   930 ----LIPSITARFSTQTKLEEMEQFFAKYPEAGAGTAARVRALETVKNNIVWLAENLEGVD 986
                .|.::.:.|::..|.:|:|:|||...:.......: :::|.|..|..|: |:::..|
plant   809 LITRFISAVVSPFASFEKAKEVEEFFATRSKPSMARTLK-QSIERVHINANWV-ESIKKED 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 KLF9_13_N-like <17..118 CDD:425361
M1_APN-Q_like 130..573 CDD:341064 183/445 (41%)
ERAP1_C 654..973 CDD:463368 91/343 (27%)
APM1NP_195035.2 M1_APN-Q_like 18..453 CDD:341064 184/445 (41%)
ERAP1_C 536..855 CDD:463368 91/343 (27%)
Blue background indicates that the domain is not in the aligned region.

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