DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8773 and Rnpep

DIOPT Version :10

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:522 Identity:114/522 - (21%)
Similarity:186/522 - (35%) Gaps:164/522 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 RQAFPCFDEPALKAEFTITLVHPSGEDYHALSNMNVDSSVSQGAFQEVTFAKSVPMSTYLACFIV 319
            |..|||||.||:|..::..:..|.|  :.|:  |:..:...:|. .:..|..:.|:.:||....:
  Rat   176 RAFFPCFDTPAVKCTYSALVEVPDG--FTAV--MSASTWERRGP-NKFFFQMNQPIPSYLIALAI 235

  Fly   320 SDFAYKQVSIDTKGIGETFSMSVYATPEQLDKVDLAVTIGKGVIEYYI--------DYFQIAYPL 376
            .|.|..:|...::         |:|.|   ..::.|.....||||.::        .|....|.|
  Rat   236 GDLASAEVGPRSR---------VWAEP---CLIEAAKEEYNGVIEEFLATGEKLFGPYVWGRYDL 288

  Fly   377 PKLDMAAIPDFVSGAMEHWGLVTYRETSLLYDEATSSATNKQRIASVIAHEFAHMWFGNLVTMNW 441
                :...|.|..|.||: ..:|:....||        ...:.:|.||.||.:|.|||||||...
  Rat   289 ----LFMPPSFPFGGMEN-PCLTFVTPCLL--------AGDRSLADVIIHEISHSWFGNLVTNAN 340

  Fly   442 WNDLWLNEGFASFVE-----------YLGVDAVYPEWKMRDQFTVSTLHSVLTLDGTLGSHPI-- 493
            |.:.||||||..:.:           |..::|......:|....||.           ..:|:  
  Rat   341 WGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMDVSG-----------EENPLNK 394

  Fly   494 ----IQTVENPDQITEIFDTITYSKGSSLVRMLEDFLG-ETTFRQAVTNYLNEYKYSTAETGNF- 552
                |:...:||   :.::...|.||...|..|...:| :..|.:.:..|::|:|:.:....:| 
  Rat   395 LRVKIEPGVDPD---DTYNETPYEKGYCFVSYLAHLVGDQEQFDKFLKAYVDEFKFQSILAEDFL 456

  Fly   553 ------FTEIDK---------------------------------LELGYNVTEI---------- 568
                  |.|:.|                                 ::....:.|:          
  Rat   457 EFYLEYFPELKKKGVDSIPGFEFNRWLNTPGWPPYLPDLSPGDSLMKPAEELAELWAASEPDMQA 521

  Fly   569 -----MLTW-TVQM-----------GLPVVTIEKVSDTEYKLTQKR-----------FLSNPNDY 605
                 :.|| |.|:           .||...::|:.:|..|::..:           .|.|    
  Rat   522 IEAVAISTWKTYQLVYFLDKILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIILKN---- 582

  Fly   606 DADHEPSEFNYRWSIPITYFTSSDSVVQRLWFYHDQ---SEITVTVPAAVEWIKFNADQVGYYRV 667
              ||: .||   |.:. .:..|.......|..||..   ||:..|:  |.|.....|.|:....|
  Rat   583 --DHQ-EEF---WKVK-DFLQSQGKQKYTLPLYHAMMGGSEMARTL--AKETFAATASQLHSNVV 638

  Fly   668 NY 669
            ||
  Rat   639 NY 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 KLF9_13_N-like <17..118 CDD:425361
M1_APN-Q_like 130..573 CDD:341064 86/399 (22%)
ERAP1_C 654..973 CDD:463368 5/16 (31%)
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 83/351 (24%)
Leuk-A4-hydro_C 530..645 CDD:462686 29/124 (23%)
Blue background indicates that the domain is not in the aligned region.

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