DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8773 and Rnpepl1

DIOPT Version :10

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001258106.1 Gene:Rnpepl1 / 684035 RGDID:1595210 Length:724 Species:Rattus norvegicus


Alignment Length:775 Identity:159/775 - (20%)
Similarity:259/775 - (33%) Gaps:204/775 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PGSTAEPGSTAEPGSTASPGSTVTPGSTASTSEPGTTASPEKIDYRLPGTLKPTHYDLYLFPNIE 141
            ||:.|.|   |.|.....|...|...|:|..             :||      .|..|.|....|
  Rat    11 PGAEAAP---ARPPPEPPPALEVASASSAQL-------------FRL------RHLQLGLELRPE 53

  Fly   142 TGEFSGQETITI---------TVEEATDQIVLHSLNLNISSVSIMN--------TGSDTLEILET 189
            ..|.:|...:.:         .|.:|...:.|||::...:|.:..:        .||.  ..|..
  Rat    54 ARELAGCLVLELCALRPAPRALVLDAHPALRLHSVSFRRASATSESPCTFAFPAPGSG--PPLPA 116

  Fly   190 TVDAVREF-----LIFQLNEPLT---KGRTVRLHIGFEGSMANKIVGLYSSSYVKEDETRKWIAT 246
            ..||....     |.|:| :|.|   ...|:.|....:.....:::..|:|:    |....|...
  Rat   117 FADAPGAESAGCPLAFRL-DPFTDYGSSLTITLPPEVQAHQPFQVIVRYTST----DAPAIWWLD 176

  Fly   247 SKFEPTYA---------------RQAFPCFDEPALKAEFTITLVHPSGEDYHALSNMNVDSSVSQ 296
            .  |.||.               |..|||||.||:|..::..:..|||        :.|..|.:|
  Rat   177 P--ELTYGNAKPFVFTQGHSVCNRSFFPCFDTPAVKCTYSAVVKAPSG--------VQVLMSATQ 231

  Fly   297 GAFQE----VTFAKSVPMSTYLACFIVSDFAYKQVSIDTKGIGETFSMSVYATPEQLDKVDLAVT 357
            .|:.|    ..|....|:..||...:..|.  |...|..:.       .|:|.|..|   ..|.:
  Rat   232 SAYVEEEGLYHFHMEHPVPAYLVALVAGDL--KPADIGPRS-------RVWAEPCLL---PTATS 284

  Fly   358 IGKGVIEYYIDYFQIAY-PL--PKLDMAAI-PDFVSGAMEHWGLVTYRETSLLYDEATSSATNKQ 418
            ...|.:|.::...:..| |.  .:.|:..: |.|...|||: ..:|:..:|:|..:        :
  Rat   285 KLSGAVEQWLSAAERLYGPYMWGRYDIVFLPPSFPIVAMEN-PCLTFIISSILESD--------E 340

  Fly   419 RIASVIAHEFAHMWFGNLVTMNWWNDLWLNEGFASFVEYLGVDAVYPE--WKMRDQFTVSTLHSV 481
            .:...:.||.||.||||.||...|.::||:||.|::.:.......|..  ..:...|.:..||..
  Rat   341 FLVIDVIHEVAHSWFGNAVTNATWEEMWLSEGLATYAQRRITTETYGAAFTCLETAFRLDALHRQ 405

  Fly   482 LTLDGTLGSHPIIQTVE-------NPDQITEIFDTITYSKGSSLVRMLEDFLGE-TTFRQAVTNY 538
            :.|   ||....:..::       ||..:..:|   ||.||...|..|....|: ..|...:..|
  Rat   406 MRL---LGEDSPVSKLQVKLEPGVNPSHLMNLF---TYEKGYCFVYYLSQLCGDPQRFDDFLRAY 464

  Fly   539 LNEYKYSTAETG-------NFFTEIDKLELGYNVTEIMLTWTVQMGLPVVTIEKVSDTEYKLTQK 596
            :.:||:::....       :||.|:.:..:..........|....|.|:        .|..|:|.
  Rat   465 VEKYKFTSVVAQDLLDSFLSFFPELKEQSVDCRAGLEFERWLNATGPPL--------AEPDLSQG 521

  Fly   597 RFLSNPNDYDADHEPSEFNYRWSIPITYFTSSDSVVQRLWFYHDQSEITVTVPAAVEWIKFNADQ 661
            ..|:.|.:                          .:.:||......:...:..|           
  Rat   522 SSLTRPVE--------------------------ALFQLWTAEPLEQAAASASA----------- 549

  Fly   662 VGYYRVNYDTDLWNDLADQLVVQPSAFGSVDRAHLLNDAFALADSTQLPYATAFELTRYLDKETD 726
                   .|...|.      ..|.:.|  :||         |.|.:.||......|::......|
  Rat   550 -------IDISKWR------TFQTALF--LDR---------LLDGSPLPQEVVMSLSKCYSSLLD 590

  Fly   727 YVPWSVAASRLTSLKRTLYYTSTYAKYKKYATALIEPIYTALTWTVGEDHLDNRLRVTAL 786
            .:...:....|..:.|..||...: :.:::....:..:||...:   ||.....|:..||
  Rat   591 SMNTEIRIRWLQIVVRNDYYPDLH-RVRRFLENQMSRMYTIPLY---EDLCTGALKSFAL 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 KLF9_13_N-like <17..118 CDD:425361 10/40 (25%)
M1_APN-Q_like 130..573 CDD:341064 113/507 (22%)
ERAP1_C 654..973 CDD:463368 23/133 (17%)
Rnpepl1NP_001258106.1 M1_LTA4H 30..507 CDD:341062 119/539 (22%)
Leuk-A4-hydro_C 555..668 CDD:462686 22/113 (19%)

Return to query results.
Submit another query.