DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8773 and lta4h

DIOPT Version :9

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_998451.1 Gene:lta4h / 406575 ZFINID:ZDB-GENE-040426-2477 Length:611 Species:Danio rerio


Alignment Length:536 Identity:123/536 - (22%)
Similarity:202/536 - (37%) Gaps:140/536 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VTPGSTASTSEPGTTASPEKIDYRLPGTLKPTHYDLYLFPNIETGEFSGQETITITV-EEATDQI 162
            :||     .|:|.:.:|..|...:        |.:|....:.:.....|:..:|:.| |:....:
Zfish     1 MTP-----VSDPSSFSSLSKCSTK--------HLNLIYHVDFDRHVLKGKVALTVEVLEDKFSSL 52

  Fly   163 VLHSLNLNISSVSIMNTGSDTLEI----------LETTVDAVREFLIFQLNEPLTKGRTVRLHIG 217
            .|.|.:|.||.|| .|..:...|:          ||.|       |.|:    |::|:.|.:.|.
Zfish    53 TLDSKDLKISKVS-ANGQAAKFELGAKHKFKGSPLEIT-------LPFE----LSRGQHVIVEIE 105

  Fly   218 FEGSMANKIVGLYSSSYVKEDETRKWIAT------------SKFEPTYARQAFPCFDEPALKAEF 270
            :|.|.....:              :|:..            |:.:.|:.|...||.|.|::|..:
Zfish   106 YETSPTATAL--------------QWLTPKQTAGKKHPYLFSQCQATHCRTMVPCQDTPSVKHTY 156

  Fly   271 TITLVHPSGEDYHAL-----SNMNVDSSVSQGAFQEVTFAKSVPMSTYLACFIVSDFAYKQVSID 330
            ...:..|  .:..||     .....|.|.|......  |.:.|||.:||...:|.       :::
Zfish   157 YAQVSVP--RELVALMSALRDGQEPDPSDSSRVIYR--FRQPVPMPSYLIAIVVG-------ALE 210

  Fly   331 TKGIGETFSMSVYATPEQLD-------KVDLAVTIGKGVIEYYI--DYFQIAYPLPKLDMAAIPD 386
            ::.||.  ...|::..|.:|       :.:..:...:.:...|:  .|..:..|         |.
Zfish   211 SREIGP--RSRVWSEKEYVDEAAYEFAETETMLKTAESLAGPYVWGQYDVLVLP---------PS 264

  Fly   387 FVSGAMEHWGLVTYRETSLLYDEATSSATNKQRIASVIAHEFAHMWFGNLVTMNWWNDLWLNEGF 451
            |..|.||:..|.....|.|..|.:         :|.|||||.:|.|.|||||...|...|||||.
Zfish   265 FPYGGMENPCLTFVTPTVLAGDRS---------LAGVIAHEISHSWTGNLVTNRTWEHFWLNEGH 320

  Fly   452 ASFVEYLGVDAVYPE----------WKMRDQFTVSTLHSVLTLDGTLGSHPIIQTVENPDQI--T 504
            ..::|.:....:..|          ||        .||..:...|  .::.:...|.|..::  .
Zfish   321 TVYIERMIARCMEGEQLRQFKGIGGWK--------ELHESVKQFG--ANNVLTNLVPNLHEVDTD 375

  Fly   505 EIFDTITYSKGSSLVRMLEDFL-GETTFRQAVTNYLNEYKY---STAETGNF-FTEI-DKLELGY 563
            |.|.::.|.||.:|:..||:.: |...|...|.:|:..:.|   :|.|..|: ||.. ||:::..
Zfish   376 EAFSSVPYEKGFALLYHLEELMGGPEVFMGFVKSYIQLFAYGSVTTEEWKNYLFTYFKDKVDILN 440

  Fly   564 NVTEIMLTWTVQMGLP 579
            .|     .|...|..|
Zfish   441 KV-----DWNAWMHTP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 Peptidase_M1 122..515 CDD:279741 96/441 (22%)
M1_APN_2 130..579 CDD:189008 116/503 (23%)
ERAP1_C 655..969 CDD:288671
lta4hNP_998451.1 leuko_A4_hydro 18..607 CDD:274120 117/514 (23%)
M1_LTA4H 18..449 CDD:189006 115/510 (23%)
Leuk-A4-hydro_C 467..606 CDD:286244
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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