DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8773 and Lta4h

DIOPT Version :10

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001025202.1 Gene:Lta4h / 299732 RGDID:1311333 Length:611 Species:Rattus norvegicus


Alignment Length:642 Identity:138/642 - (21%)
Similarity:235/642 - (36%) Gaps:193/642 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 TITITVEEATDQIVLHSLNLNISSVSIMNTGSDTLEILETTVDAVREF----LIFQLNEPLTKGR 210
            |..:||:...|.  |.||.|:...::|.....:..|: :.|:...:.:    :...|...|:|.:
  Rat    38 TAALTVQSQEDN--LRSLTLDTKDLTIEKVVINGQEV-KYTLGESQGYKGSPMEISLPIALSKNQ 99

  Fly   211 TVRLHIGFEGSMANKIVGLYSSSYVKEDETRKWIAT------------SKFEPTYARQAFPCFDE 263
            .|.:.|.||.|              .:....:|:..            |:.:..:.|...||.|.
  Rat   100 EVVIEISFETS--------------PKSSALQWLTPEQTSGKQHPYLFSQCQAIHCRAILPCQDT 150

  Fly   264 PALKAEFTITLVHPSGEDYHALSNMNVDSSVSQGAFQE--------VTFAKSVPMSTYLACFIVS 320
            |::|..:|..:..|  ::..||.     |::..|...:        ..|.:.||:..||...:|.
  Rat   151 PSVKLTYTAEVSVP--KELVALM-----SAIRDGEAPDPEDPSRKIYRFNQRVPIPCYLIALVVG 208

  Fly   321 DFAYKQVSIDTKGIG---------ETFSMSVYATPEQLDKVDLAVTIGKGVIEYYIDYFQIAYPL 376
                   :::::.||         |....|.|...|....:.:|..:|...:  :..|..:..| 
  Rat   209 -------ALESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGGPYV--WGQYDLLVLP- 263

  Fly   377 PKLDMAAIPDFVSGAMEHWGLVTYRETSLLYDEATSSATNKQRIASVIAHEFAHMWFGNLVTMNW 441
                    |.|..|.||:..|.....|.|..|::         :::|||||.:|.|.|||||...
  Rat   264 --------PSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGNLVTNKT 311

  Fly   442 WNDLWLNEGFASFVEYLGVDAVYPEWKMRDQFTVSTLHSVLTLDGTLG-SHPIIQTV-----ENP 500
            |:..|||||...::|......::.| |.|....:.....:.....|.| |||..:.|     .:|
  Rat   312 WDHFWLNEGHTVYLERHICGRLFGE-KFRHFHALGGWGELQNTIKTFGESHPFTKLVVDLKDVDP 375

  Fly   501 DQITEIFDTITYSKGSSLVRMLEDFL-GETTFRQAVTNYLNEYKYSTAET--------GNFFTEI 556
            |   ..:.:|.|.||.:|:..||..| |...|...:..|:.::.|.:..|        .:|..::
  Rat   376 D---VAYSSIPYEKGFALLFYLEQLLGGPEVFLGFLKAYVEKFSYQSVTTDDWKSFLYAHFKDKV 437

  Fly   557 DKL-ELGYNVTEIMLTWTVQMGLPVV------------------------------TIEKVSD-T 589
            |.| ::.:|      .|....|||.|                              :||.:.| :
  Rat   438 DLLNQVDWN------AWLYAPGLPPVKPNYDVTLTNACIALSQRWVTAKEEDLNSFSIEDLKDLS 496

  Fly   590 EYKLTQ----------------KRFLSNPNDYDADHEPSEFNYRWSIPITYFTSSDSVVQRLWFY 638
            .::|.:                || :....:::|.:. ||..:||              .||.. 
  Rat   497 SHQLNEFLAQVLQKAPLPLGHIKR-MQEVYNFNAINN-SEIRFRW--------------LRLCI- 544

  Fly   639 HDQSEITVTVPAAVEWIKFNADQVGYYRVNYDTDLWNDLADQLVVQPSAFGSVDRAH 695
              ||:....:|.|::.    |.:.|  |:.:...|:.|||        ||   |::|
  Rat   545 --QSKWEEAIPLALKM----ATEQG--RMKFTRPLFKDLA--------AF---DKSH 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 KLF9_13_N-like <17..118 CDD:425361
M1_APN-Q_like 130..573 CDD:341064 105/471 (22%)
ERAP1_C 654..973 CDD:463368 11/42 (26%)
Lta4hNP_001025202.1 leuko_A4_hydro 6..608 CDD:274120 138/642 (21%)
Blue background indicates that the domain is not in the aligned region.

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