DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8773 and ltah-1.1

DIOPT Version :9

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001023056.1 Gene:ltah-1.1 / 178176 WormBaseID:WBGene00016589 Length:609 Species:Caenorhabditis elegans


Alignment Length:518 Identity:129/518 - (24%)
Similarity:223/518 - (43%) Gaps:114/518 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EPGTTASPEKIDYRLPGTLKPTHYDLYLFPNIETGEFSGQETITITVEEATDQIVLHSLNLNISS 173
            :|.|.|:.|::..        :||.|....:.|....:|..:||:.|::.|::|||.:.:|::.|
 Worm     8 DPSTAANYEQVTV--------SHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQS 64

  Fly   174 VSIMNTGSD-----TLEILETTVDAVREFLIFQLNEPLTKGRTVRLHIGFEGSMANKIVGLYSSS 233
            |::...|..     |||    ...|:.:.|:. ..|.|..|....|.|.:|.|  |....|   .
 Worm    65 VALNLNGEPKKAGFTLE----DNQALGQKLVI-TTESLKSGDRPVLEIKYESS--NNAAAL---Q 119

  Fly   234 YVKEDETRKWIAT---SKFEPTYARQAFPCFDEPALKAEFTITLVHPSGEDYHALSNMNVDSSVS 295
            ::..::|...:|.   |:.:...||...||.|.|::|:.:...:..|.|     |:.:.  |::.
 Worm   120 FLTAEQTTDRVAPYLFSQCQAINARSIVPCMDTPSVKSTYEAEVCVPIG-----LTCLM--SAIG 177

  Fly   296 QGAFQE-------VTFAKSVPMSTYLACFIVSDFAYKQVSIDTKGIGETFSMSVYATPEQLD--- 350
            ||:...       .:|.:.|.:.:||...:|.....|::|         ...:|:|.|.|.:   
 Worm   178 QGSTPSECGKRTIFSFKQPVSIPSYLLAIVVGHLERKEIS---------ERCAVWAEPSQAEASF 233

  Fly   351 ----KVDLAVTIGKGVIEYYIDYFQIAYPLPKLDMAAIP-DFVSGAMEHWGLVTYRETSLLYDEA 410
                :.:..:.:.:.|...|:        ..:.|:..:| .|..|.||:..|.....|.|..|.:
 Worm   234 YEFAETEKILKVAEDVAGPYV--------WGRYDLVVLPATFPFGGMENPCLTFITPTLLAGDRS 290

  Fly   411 TSSATNKQRIASVIAHEFAHMWFGNLVTMNWWNDLWLNEGFASFVEYLGVDAVYPEWKMR----- 470
                     :.:|||||.:|.|.|||||...|...||||||..|:|......:|.|.:.:     
 Worm   291 ---------LVNVIAHEISHSWTGNLVTNFSWEHFWLNEGFTVFLERKIHGKMYGELERQFESES 346

  Fly   471 --DQFTVSTLHSVLTLDGTLGSHPIIQTVEN-----PDQITEIFDTITYSKGSSLVRMLEDFLGE 528
              ::..|.|::.|...|     |...:.|:|     ||   :.|.::.|.|||:|:..:|..||:
 Worm   347 GYEEALVRTVNDVFGPD-----HEYTKLVQNLGNADPD---DAFSSVPYEKGSALLFTIEQALGD 403

  Fly   529 TT-FRQAVTNYLNEYKYSTAETGNF-------FTE----IDKLELGYNVTEIMLTWTVQMGLP 579
            .: |.|.:.:|:.:|.|.|..|..:       ||:    :|.::  :|:      |..:.|||
 Worm   404 NSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSFTDKKVILDNID--WNL------WLHKAGLP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 Peptidase_M1 122..515 CDD:279741 103/427 (24%)
M1_APN_2 130..579 CDD:189008 123/495 (25%)
ERAP1_C 655..969 CDD:288671
ltah-1.1NP_001023056.1 M1_LTA4H 8..453 CDD:189006 126/511 (25%)
Leuk-A4-hydro_C 468..608 CDD:312599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.