DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8773 and pam-1

DIOPT Version :10

Sequence 1:NP_650273.2 Gene:CG8773 / 41634 FlyBaseID:FBgn0038135 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001023210.1 Gene:pam-1 / 177528 WormBaseID:WBGene00003914 Length:948 Species:Caenorhabditis elegans


Alignment Length:903 Identity:301/903 - (33%)
Similarity:462/903 - (51%) Gaps:58/903 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GTTASPEKIDYRLPGTLKPTHYDLYLFPNIETGEFSGQETITITVEEATDQIVLHSLNLNISSVS 175
            |..::..|.: |||...:||||::.|.|.:....|.|..||.:|::||||.:.:|:.:|.|.|||
 Worm    69 GNPSAAVKFE-RLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVS 132

  Fly   176 IMNTGSDTLEILETTVDAVREFLIFQLNEPLT-KGRTVRLHIGFEGSMANKIVGLYSSSYVKEDE 239
            ::....|..:.|||:.|.....|..:|  |.| :.:.|:|...|.|.:.:|:.|.|.|.|..::.
 Worm   133 LITQPGDASKSLETSYDDKLNILTIKL--PTTMQPQKVQLDFKFVGELNDKMRGFYRSQYKDKNG 195

  Fly   240 TRKWIATSKFEPTYARQAFPCFDEPALKAEFTITLVHPSGEDY-HALSNMNV--DSSVSQGAFQE 301
            |.|::|:::||.||||.||||||||..||.|.:||   ..|:: .|||||||  ::..:.|..:.
 Worm   196 TEKFLASTQFESTYARYAFPCFDEPIYKATFDVTL---EVENHLTALSNMNVISETPTADGKRKA 257

  Fly   302 VTFAKSVPMSTYLACFIVSDFAYKQVSIDTK-GIGETFSMSVYATPEQLDKVDLAVTIGKGVIEY 365
            ||||.|..||:||..|.|.:..|  :|..|| |:    .|.||..|.:.::...::.:....|::
 Worm   258 VTFATSPKMSSYLVAFAVGELEY--ISAQTKSGV----EMRVYTVPGKKEQGQYSLDLSVKCIDW 316

  Fly   366 YIDYFQIAYPLPKLDMAAIPDFVSGAMEHWGLVTYRETSLLYDEATSSATNKQRIASVIAHEFAH 430
            |.::|.|.|||||.|:.|||||..||||:||||||||.:||.|...:|...|.|:|.|:|||.||
 Worm   317 YNEWFDIKYPLPKCDLIAIPDFSMGAMENWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAH 381

  Fly   431 MWFGNLVTMNWWNDLWLNEGFASFVEYLGVDAVYPEWKMRDQFTVSTLHSVLTLDGTLGSHPIIQ 495
            :||||||||.||.||||.||||||:||:.|.|..||:|:...|....|.|.:.||....||||..
 Worm   382 LWFGNLVTMKWWTDLWLKEGFASFMEYMFVGANCPEFKIWLHFLNDELASGMGLDALRNSHPIEV 446

  Fly   496 TVENPDQITEIFDTITYSKGSSLVRMLEDFLGETTFRQAVTNYLNEYKYSTAETGNFFTEIDKLE 560
            .::||:::.||:|:|||:|.:|:.|||..:|.|..|::.:..||..::||.|.|.:.:|.:.:..
 Worm   447 EIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEAS 511

  Fly   561 LGYNVTEIMLTWTVQMGLPVVTIEKVSDTEYKL---TQKRFLSNPNDYDADHEPSEFNYRWSIPI 622
             |.||.|:|..||.|||.||:.:.:..|...::   .|:||:|     |...:|.  |.:|.:||
 Worm   512 -GQNVNELMSGWTQQMGFPVLKVSQRQDGNNRILTVEQRRFIS-----DGGEDPK--NSQWQVPI 568

  Fly   623 TYF--TSSDSVVQRLWFYHDQSEITVTVPAAVEWIKFNADQVGYYRVNYD----TDLWNDLADQL 681
            |..  :|...|..|......|.|.|:...|..||:|.|:...|:|||.|.    |.:..|:|.: 
 Worm   569 TVAVGSSPSDVKARFLLKEKQQEFTIEGVAPGEWVKLNSGTTGFYRVEYSDEMLTAMLPDIASR- 632

  Fly   682 VVQPSAFGSVDRAHLLNDAFALADSTQLPYATAFELTRYLDKETDYVPWSV---AASRLTSLKRT 743
                 ....:||..|:||..||.::.::..|...::.....||.:||.|..   ..|:|.:..|.
 Worm   633 -----RMPVLDRFGLINDLSALLNTGRVSIAQFVQVAASSAKEDEYVVWGAIDEGMSKLLACARE 692

  Fly   744 LYYTSTYAKYKKYATALIEPIYTALTWT--VGEDHLDNRLRVTALSAACSLGLESCLTEAGEQFN 806
            : ...|....|:....:.|.....|.:.  .|||.....||....:.....|.:..:.:..:.||
 Worm   693 M-SEDTLKSAKQLVVKMFEQTGAELGFAEQAGEDSQKMMLRSLVQARLARAGHQPTIDKFTQMFN 756

  Fly   807 AWLAKPEDRP-KADVRETVYYYGIQS-VGSQEDWDAVWELFVNESDASEKSKLMYGLSAIQIPWI 869
            .:|.|  ..| ..|:|  :..:|:.: .|.:|.:|.:..|....:....:.:.|..:|......:
 Worm   757 DFLEK--GTPIHPDIR--LATFGVVARYGGKEGFDKLMNLRETTTFQEIERQTMVAMSQTPEESL 817

  Fly   870 LQRYIDLAWNEEYVRGQDYFTCLTYISANPVGESLVWDYVRENWQRLVDRF-GLNERYLGNLIPS 933
            |.:..:..:.:..||.||.........|..:|:...|.|..|:.:..:|:: |.|.......:..
 Worm   818 LAQLFEYGFEKNKVRPQDQLYLFLGTGATHMGQQYAWKYFCEHIKEFLDKYGGANSSLFQRCLKF 882

  Fly   934 ITARFSTQTKLEEMEQFFAK---YPEAGAGTAARV--RALETVKNNIVWLAENLEGVD 986
            ....|..:.:..|.:.||..   ..:....|.||.  :.:|.::.|...|..|.:.::
 Worm   883 AGESFGNEKRAVEFQDFFCNCNVLSDTDRQTLARPIGQTVEAIRLNARLLESNRQIIE 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8773NP_650273.2 KLF9_13_N-like <17..118 CDD:425361 1/6 (17%)
M1_APN-Q_like 130..573 CDD:341064 193/447 (43%)
ERAP1_C 654..973 CDD:463368 72/335 (21%)
pam-1NP_001023210.1 M1_APN-Q_like 87..524 CDD:341064 194/448 (43%)
ERAP1_C 602..927 CDD:463368 72/335 (21%)

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