DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8630 and Scd2

DIOPT Version :10

Sequence 1:NP_731781.1 Gene:CG8630 / 41629 FlyBaseID:FBgn0038130 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_114029.1 Gene:Scd2 / 83792 RGDID:621177 Length:358 Species:Rattus norvegicus


Alignment Length:346 Identity:161/346 - (46%)
Similarity:215/346 - (62%) Gaps:28/346 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AATPAASAAPSAATPSQKVAKKAEAKTP-----------------------ENKPYELEIVWRNV 67
            :||...:|.||..  .|...:|.| |.|                       |..|.:||.||||:
  Rat    14 SATTTITAPPSGG--QQNGGEKFE-KNPHHWGADVRPEIKDDLYDPSYQDEEGPPPKLEYVWRNI 75

  Fly    68 GLFVILHSMALYGLYLVFAESAYWELLPVYATMFLGGLGITAGVHRLWSHKAYKAKLPLRIFLML 132
            .|..:||..||||:.||.:...| ..|..|....:..||||||.||||||:.|||:||||:||::
  Rat    76 ILMALLHIGALYGITLVPSCKVY-TCLFAYLYYVISALGITAGAHRLWSHRTYKARLPLRLFLII 139

  Fly   133 CQSLAFQNSIWEWTRDHRVHHKFTDTHADPHNSRRGFFFAHMGWLMCKKHPDVTSKGKQISMEDI 197
            ..::||||.::||.||||.||||::||||||||||||||:|:|||:.:|||.|..||.::.|.|:
  Rat   140 ANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDL 204

  Fly   198 EQDPVVMFQKKMYFVVMPICCFALPMIFPYYVMGSSLRVCFFTCSMLRFCLSLHFTWLVNSAAHF 262
            :.:.:||||::.|...:.:.||.||.:.|:|..|.:........:.||:.:.|:.|||||||||.
  Rat   205 KAEKLVMFQRRYYKPGLLLMCFILPTLVPWYCWGETFVNSLCVSTFLRYAVVLNATWLVNSAAHL 269

  Fly   263 YGMKPYDVNVSAMNNKLVSTLTIGEGWHNYHHVFPWDYKAAELGTYSFNWTTAFIDVMAKIGQAY 327
            ||.:|||.|:|:..|.|||...:|||:|||||.||:||.|:|. .:..|:||.|||.||.:|.||
  Rat   270 YGYRPYDKNISSRENILVSMGAVGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMALLGLAY 333

  Fly   328 DLKFVSQEMVYKRVLRTGDGS 348
            |.|.||:..|..|:.|||:.|
  Rat   334 DRKRVSKAAVLARIKRTGEES 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8630NP_731781.1 Delta9-FADS-like 90..330 CDD:239582 125/239 (52%)
Scd2NP_114029.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..43 10/31 (32%)
Delta9-FADS-like 99..336 CDD:239582 124/237 (52%)
Histidine box-1. /evidence=ECO:0000305 119..124 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 156..160 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 297..301 3/3 (100%)

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