DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D5 and tbc1d1

DIOPT Version :10

Sequence 1:NP_731780.1 Gene:TBC1D5 / 41628 FlyBaseID:FBgn0038129 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_031751223.1 Gene:tbc1d1 / 733547 XenbaseID:XB-GENE-5959648 Length:1286 Species:Xenopus tropicalis


Alignment Length:603 Identity:111/603 - (18%)
Similarity:218/603 - (36%) Gaps:163/603 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LNGSSARESLEHLPGNGAIRVIPEAGAM--NSVERYRQEW------QVLLENLDADPESLRQSAF 67
            |...:.|..||.:..:|.:|   .|.|:  .:.|..|:.|      |:||..::.:.:.|:.|  
 Frog   803 LGDIAPRSPLEPVSEDGPVR---SAVAVRHRTTEELRELWKKAILQQILLLRMEKENQKLQAS-- 862

  Fly    68 AGDLKMSKFR-------------SVHWALLL--------RVLTSEHRSWTSQRL--QQRVRYDKF 109
            ..||:..:.:             ::.|..:|        :..|.:..:...|.:  |.|....||
 Frog   863 ENDLQNKRLKLDYEEITPCLKDVTLVWEKMLSTPGRSKIKTDTEKIHAAVGQGVPRQHRGEIWKF 927

  Fly   110 RAD--YVRNPHQLAVDCNDDPLSQSTQSVWNQYFSDQDLFAVIRQDVVRTFPGVDFFRKPL--VQ 170
            .::  .:|:.|.......|.|..:..:.:..|..:       |..|:.||||...:|...|  .|
 Frog   928 LSEQYQLRHQHISKNQLKDTPYKELLKQLTTQQHA-------ILIDLGRTFPTHPYFSAQLGAGQ 985

  Fly   171 NAMVNILFYYAREHPYMCYRQGMHEILAPIIFVVYSDHQSLLHFSELAKTDINPTLLDVLDPAYL 235
            .::.|||..|:...|.:.|.||: ..:|.::         |||.:                    
 Frog   986 LSLYNILKAYSLLDPEVGYCQGL-SFVAGVL---------LLHMT-------------------- 1020

  Fly   236 EADTYSLFSRLM--ASVESYYRVSNLVSTPGGHIEQRAESPGDNETSTEAEVIGQLNFIR-DKIL 297
            |.|.:.:...||  ..:...||...:..                          |:...: .::|
 Frog  1021 EEDAFKMLKFLMYDLGLRKQYRPDMITL--------------------------QIQMYQLSRLL 1059

  Fly   298 AKQDQHLHHYLQKMEIPLHIFGIRWLRLLFGREFMLLDLLLLWDAIFADSDRFDLPNYILVAMLV 362
            ....:.|:::|:..||...::...|...:|..:|.|..:..::|.||....              
 Frog  1060 HDYHRDLYNHLETYEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQGS-------------- 1110

  Fly   363 HIRDKLLLSDYTTSLTYLMRYPNNVDVHLVLRHALFMLNPKQFEYPPNAFTCVSFANSSADKDVP 427
            .:..|:.||...:....::::.|...:...:::.|..|...|.|...|....:..:......:|.
 Frog  1111 EVIFKVALSLLGSHKPLILQHENLESIVEFIKNTLPNLGLVQMEKTINQVFEMDISKQLQAYEVE 1175

  Fly   428 PPAGQRPRTNSENSSMATSGSQIDRQITFMQERNAADSSALAKLQDTH-RVAMDGYLENSPELLR 491
            ....|....:|...|.....:::::..:.::::|   ...|.:||.:| |:.:   ||::.|.|:
 Frog  1176 YHVLQDELIDSSPLSDNQRINKLEKANSTLRKQN---FDLLEELQVSHGRIQV---LESTVENLQ 1234

  Fly   492 ---LELKNAQTVIKIARSKLQSYLSTVRHHVGKQANGSEELGRTLDGIEELCSFLDVKFMFPLHQ 553
               ::||.:...:::.||.|.:.:..:|..: |...|:           :||:            
 Frog  1235 SNEVKLKRSVLTLELERSALLNTIEELRAQI-KDMQGN-----------KLCN------------ 1275

  Fly   554 RSAPIDQALEANEQKQLN 571
                 ||    ||..|||
 Frog  1276 -----DQ----NEPNQLN 1284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D5NP_731780.1 TBC <150..369 CDD:214540 41/223 (18%)
tbc1d1XP_031751223.1 PTB_TBC1D1_like 166..397 CDD:269967
DUF3350 805..860 CDD:463365 13/57 (23%)
TBC 912..1129 CDD:214540 53/293 (18%)
SMC_prok_B <1150..>1269 CDD:274008 24/125 (19%)
Blue background indicates that the domain is not in the aligned region.

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