DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D5 and GAPcenA

DIOPT Version :10

Sequence 1:NP_731780.1 Gene:TBC1D5 / 41628 FlyBaseID:FBgn0038129 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster


Alignment Length:726 Identity:123/726 - (16%)
Similarity:206/726 - (28%) Gaps:301/726 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EWQVLLENLDAD--------------PESLRQSAFAGDLKMSKFRSVHWALLLRVLTSEHRSWTS 97
            ||..:|...|::              ||:||:..              |..|..|         .
  Fly   629 EWDPILREWDSEKRPKNLAPLVRLGVPEALREKI--------------WQKLANV---------E 670

  Fly    98 QRLQQRVRYDKFRADYVRNPHQLAVDCNDDPLSQSTQSVWNQYFSDQDLFAVIRQDVVRTFPGVD 162
            .|::..   ||::....:.     ..|.                      .||::|:.||||...
  Fly   671 GRMEMN---DKYKILITKE-----TKCE----------------------TVIQRDIHRTFPAHK 705

  Fly   163 FFRK--PLVQNAMVNILFYYAREHPYMCYRQGMHEILAPIIFVVYSDHQSLLHFSELAKTDINPT 225
            .|::  ...|:|:..:...||.....:.|.||:..|.|.:          |||..          
  Fly   706 CFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASL----------LLHMP---------- 750

  Fly   226 LLDVLDPAYLEADTYSLFSRLMASVESYYRVSNLVSTPGGHIEQRAESPGDNETSTEAEVIGQLN 290
                      |.|.:.:...||..    |.:.:|.                   ....||:....
  Fly   751 ----------EEDAFCVLVALMYD----YGLRDLY-------------------KAGFEVLYLRL 782

  Fly   291 FIRDKILAKQDQHLHHYLQKMEIPLHIFGIRWLRLLFGREFMLLDLLLLWDAIFADSDRFDLPNY 355
            :..::::..|...||.:.....|..|::..:|...|:...|.|..:..:.|....|.    ||..
  Fly   783 YQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLDG----LPVL 843

  Fly   356 ILVAMLVHIRDKLLLSDYTTSLTYLMRYPNNVDVHLVLRHALFMLNPKQFEYPPNAFTCVSFANS 420
            ..||:       .|||...:.|..|       |...:|::....| ||:         |.|   |
  Fly   844 FQVAV-------TLLSICESDLRQL-------DFEGILKYFRVTL-PKK---------CRS---S 881

  Fly   421 SADKDVPPPAGQRP------------------------------RTNSENSSMATSGSQIDRQIT 455
            |..:.|...|.:|.                              |...|...|......:::|:|
  Fly   882 SQARKVMKQACERKIKKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEERRKMQAEIDALNKQLT 946

  Fly   456 FMQERNAADSSALAKLQDTHRVAMDGYLENSPELLRLELKNAQTVIKIARSKLQSYLSTVRHHVG 520
            ..:||      |:.| :..|    .|.::...::::.:.::..|        |...|..|.|.|.
  Fly   947 SAKER------AVEK-EKKH----TGIIQEYKQIIQRQEQDMNT--------LSETLGKVMHMVS 992

  Fly   521 ------KQANGSEELGRTLDG-------------------------------------------- 535
                  :|.:...:..::.||                                            
  Fly   993 NCQDCQQQIDAGNDNAKSDDGKNRGQTDAMRNANEHPLGPLDPLNAASQRIRELELELAQAKLAQ 1057

  Fly   536 IEELCSFLDVKFMFPLHQRSAPIDQALEANE-------QKQLNTV--------------SKPPKP 579
            :|..|...|:.     ||.|..:.: |:.|.       .|..|::              |..|.|
  Fly  1058 VEAECKNQDLN-----HQLSNTLSE-LQTNRNSWQPWLSKTFNSLQEKVTTRGGHRDNGSGGPMP 1116

  Fly   580 TASSTPANAPAALS-----------------ATGGYQMPENAFMHSSMRRLLGELREIELSTITS 627
            :..|....||..||                 :.||.....:.|..:.:|..:..||.|.:...| 
  Fly  1117 SFQSYMGQAPTTLSEASSPSGNQEYKTFAFASVGGSPKLPSKFQATKLRNSIDSLRNIVVPLDT- 1180

  Fly   628 DEKPGNAVVQN 638
                |..:.:|
  Fly  1181 ----GKTLAEN 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D5NP_731780.1 TBC <150..369 CDD:214540 42/220 (19%)
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599
TBC 650..858 CDD:214540 57/324 (18%)
SMC_prok_B <876..>1087 CDD:274008 36/247 (15%)
TPH <883..>977 CDD:464007 14/104 (13%)
Blue background indicates that the domain is not in the aligned region.

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