DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D5 and Sgsm1

DIOPT Version :10

Sequence 1:NP_731780.1 Gene:TBC1D5 / 41628 FlyBaseID:FBgn0038129 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_063127295.1 Gene:Sgsm1 / 288743 RGDID:1308178 Length:1148 Species:Rattus norvegicus


Alignment Length:403 Identity:87/403 - (21%)
Similarity:146/403 - (36%) Gaps:130/403 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ARESLEH---LPGNGAIRVIPEAGAM-----NSVERY-RQEWQVLLENLDADPESLRQSAFAGDL 71
            |.||||.   :||:..:.:..:.|||     ...::: |.:.:   :||..:||           
  Rat   843 ANESLEEFMSIPGSLDVALPEKDGAMMDGWPGEADKHGRADSE---DNLSEEPE----------- 893

  Fly    72 KMSKFRSVHWALLLRVLTSEHRSWTSQRLQQRVRYDKFRAD-YVRNPHQLAVDCNDDPLSQSTQS 135
                ..|:..||....:||...:.||......|.|.....| |..|.|::..|     :.:..:|
  Rat   894 ----MESLFPALASLAVTSSANNETSPVSSSGVTYSPELLDLYTVNLHRIEKD-----VQRCDRS 949

  Fly   136 VWNQYFSDQDLFAVIRQDVVRTFPGVDFFRKPLVQNAMVNILFYYAREHPYMCYRQGMHEILAPI 200
            .|  ||:..:|                        ..:.||:..|..:|..:.|.|||.::||| 
  Rat   950 YW--YFTAANL------------------------EKLRNIMCSYIWQHIEIGYVQGMCDLLAP- 987

  Fly   201 IFVVYSDHQSLLHFSELAKTDINPTLLDVLDPAYLEADTYSLFSRLMASVESYYRVSNLVSTPGG 265
                                     ||.:||.   ||..:|.|:.||..:...:       ..||
  Rat   988 -------------------------LLVILDD---EALAFSCFTELMKRMNQNF-------PHGG 1017

  Fly   266 HIEQRAESPGDNETSTEAEVIGQLNFIRDKILAKQDQHLHHYLQKMEIPLHIFGIRWLRLLFGRE 330
            .:        |...:....:|..|:....:::.:...:.|.|          |..||..|.|.||
  Rat  1018 AM--------DTHFANMRSLIQILDSELFELMHQNGDYTHFY----------FCYRWFLLDFKRE 1064

  Fly   331 FMLLDLLLLWDAIFA----DSDRFDLPNYILVAMLVHIRDKLLLSDYTTSLTYLMRYPNNVDVHL 391
            .:..|:..:|:.|:|    .|..:.|  :|.:|::...||.:|  :.....|.::::.|    .:
  Rat  1065 LVYDDVFSVWETIWAAKHVSSAHYVL--FIALALVEVYRDIIL--ENNMDFTDIIKFFN----EM 1121

  Fly   392 VLRHALFMLNPKQ 404
            ..||     |.||
  Rat  1122 AERH-----NAKQ 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D5NP_731780.1 TBC <150..369 CDD:214540 45/222 (20%)
Sgsm1XP_063127295.1 None

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