DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-7 and Gpdh3

DIOPT Version :9

Sequence 1:NP_524342.3 Gene:Su(var)3-7 / 41627 FlyBaseID:FBgn0003598 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster


Alignment Length:1170 Identity:219/1170 - (18%)
Similarity:373/1170 - (31%) Gaps:392/1170 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PDLKMA------SANSETLASATHELKIMDVEGGALVDPDHIEEVETSMVIVVDDDDGDVAMVVE 76
            |:|:.|      .|.:|.:    .:||:||         |..|         |:|.|      ||
  Fly   371 PELRTALDKILTEAGNENI----KQLKVMD---------DWTE---------VNDYD------VE 407

  Fly    77 EDKHP--MRDDPCIE-DIMDDEHAPLVAELQSALNN-----------------------PDDKQA 115
            |..|.  ...|.|:| :||....:...|:|.:.:.:                       .:|:.|
  Fly   408 ETYHEKVASRDSCLETEIMPSRLSVQAAQLYNDIRDGNVGVAFKMDIDEGNRQVRLLLEKEDEMA 472

  Fly   116 SEDPLL-----------EDQEREPDAMSTKTEPSSDAESSHSYHDPMGLLERIEIHDPGDSQDDD 169
            |:..|.           :|..|......|.|...||..||.|.  |.||..:       ||.|..
  Fly   473 SDAALTVISSRLTAGQEDDNARIGHGHITNTSAESDHMSSKSI--PSGLTTK-------DSPDVL 528

  Fly   170 DEDDESSNGGGVDGGMRRKMPRAQRWLLWMKRWPWILHEDSDGTLAFCLYCN-ISINVN------ 227
            |...||.       .:......:|            |.||::......|..| :...::      
  Fly   529 DLSCESE-------PLHSSKQNSQ------------LMEDAETNFTERLKVNQLKEQIDKQEAAN 574

  Fly   228 -----NRSRHIQQHNVSLSHQERECNYLAFKKSEEETRGAISDNEIKHEFGTKSYVAAMKQKRIS 287
                 |..:.|:|...:|..:|:..|.:|..|.||:            .|..||.|.:.:.|...
  Fly   575 FKAQENLIKSIRQTIQALGDKEKMENLIAKSKMEED------------PFQLKSQVESSQLKSQV 627

  Fly   288 ETEAFNNFNWLRWLRWHPWLERSMPTGTIGTCRICSVRMNVEFVYLRKRHETTKGHMEALRNLDS 352
            |.|:....|.::...:.|                 ..:.:.|...:|.:.:.....:::|  :|.
  Fly   628 EGESSELKNQIQEEAYEP-----------------ISQADEEPSQIRSQLDEESAQLKSL--MDE 673

  Fly   353 DKRSRKRKRSKSNSVTNSGGDEAE----REKESEPEVGPEDAQDTPVVMMNGDVDSGDDPGKWCA 413
            :.|..:.:....:|:..|..|::|    ..:|.:|...|.|...                   ..
  Fly   674 ENRQLESEMQDESSLLKSSADKSEFVAYNAEEEQPIEEPTDNHQ-------------------YK 719

  Fly   414 LIPDTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHMLSTPAEKGSSDIRGIWAVFADMHPWLIAD 478
            |..|||..:        .:..|....|.::..|                 |.....|.|.:.:  
  Fly   720 LRSDTNKLK--------ELMFTDSREHLESEKH-----------------IEVKLQDEHDFDL-- 757

  Fly   479 PEDPSIGYCSVCRKRFMY--GNSEIKRK------------NHEKS----EKHTLALASAKAGIEV 525
            .|:|:||     :|...|  .|.|::.:            :|..|    |..|....:|:..|| 
  Fly   758 DEEPAIG-----KKDPTYTKENLELQERLEWQKLKQTDKPHHPYSSADLEDSTTNEGNARLPIE- 816

  Fly   526 GSADGRGGDNMD--EEEAAASDQAQSSQTDD----------SEDNDDDNWSEIQKLGKGFAHKSS 578
              .|.| ..|:|  ::......:|:..:|..          ||...|.|..|:..  :..:|..:
  Fly   817 --HDNR-FQNVDRYQDRELVQVRAELKETSGAESEKEINLISEQRPDQNQDEVNL--RPHSHIKT 876

  Fly   579 SEPRKATVRAGVRFYPWLCYSKDRKTQICKFCRVRFHNEAAKARHELSARHVKLVKQFKMRQAKL 643
            .|       .|...:.||..::...:...||    :.||..:...|..             |.||
  Fly   877 EE-------TGHHEWDWLMNNEKIDSDEQKF----YANERMETLSESD-------------QDKL 917

  Fly   644 HQGTNTQTKHNAQDDEESQEQDEEYGEEEEDAEEDSQSNFDLGTVQARKTAR-----ADNKLFVK 703
             |..|.|.|...|.|.:...........|..:||||...      .|:|...     ..|::...
  Fly   918 -QNLNYQLKEALQHDLDVMSASRGNDSNEVLSEEDSNPE------AAKKITEQPLNPTPNQIPAV 975

  Fly   704 PIPATMKGKVMVWKGRFPWLSYKKNEQRGNYAWCKLCEVSLYLPSSKWASKHQRTSRHIRLRIDR 768
            |:|.||..|....:...|..   :|:.|.             :|.....:|.|....      .:
  Fly   976 PLPVTMPSKQSHIREGSPQF---QNQPRS-------------VPPPSPQTKPQSPKE------QQ 1018

  Fly   769 KRNGGNPLKTSNKNSGEISTVVATASALASAEARQKAAMAELQAKYDWLDPDANDENHCHCRVCD 833
            .|....|::..||:  |...:..:||   ..|..::..:::.:|.   ::|.|.|.:...     
  Fly  1019 PRRTNAPVEFGNKD--EAMDLNESAS---DQEVPKRKKISKTEAV---IEPVAKDVSMAE----- 1070

  Fly   834 SRLPIKVFYLRQH--DASRKHVENKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMS 896
               |.:..:.::.  .||....|:|.:|:.:..        .|:|..|:.:..:..:|:.:   .
  Fly  1071 ---PNESLHSKKETSPASLSKQESKRKQKRSLR--------RPSSDSDSTKTTNEFEKQRQ---I 1121

  Fly   897 VRSDGSTAEPLAKRSRRSMEVRRIIRALRDSMGKR--------------QEERSQMDMARDMICS 947
            :.:..:..|.:.|:          |..:|....:|              .|.|..||       :
  Fly  1122 IENQKAQLEKMGKK----------ISVMRQGQDRRVSYKGHNPYSADPDLESRPPMD-------T 1169

  Fly   948 SFDIVTRLRTLERESVAH-NESMAQAPP-SVTVSP-IKPPEP------------------RHVMD 991
            ||:   :.||.:.:.:.| ...:..||| ...::| ::.|.|                  ||   
  Fly  1170 SFE---KDRTGDYQGLGHQRRKVVVAPPFHPPINPRVRVPRPPFDGRDHEFHTMTTAPVDRH--- 1228

  Fly   992 LFFDSISPTMK--SLPPDLAAEGKSKIMQLVCSLELRAMQRNATTPTPATVSASSKWPSSTTVTP 1054
                 ::|..|  |||..|.....|    ||.:::::..   |..|..|......|.|.....||
  Fly  1229 -----LAPAAKWSSLPTTLKLNRNS----LVANIQVKHF---AALPCQALPKPILKLPMGVPRTP 1281

  Fly  1055  1054
              Fly  1282  1281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-7NP_524342.3 BESS 991..1021 CDD:281011 8/31 (26%)
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551
NADB_Rossmann 6..174 CDD:304358
NAD_Gly3P_dh_C 195..336 CDD:284817
BCOR <961..1109 CDD:292436 33/193 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11728
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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