DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(var)3-7 and Ravus

DIOPT Version :10

Sequence 1:NP_524342.3 Gene:Su(var)3-7 / 41627 FlyBaseID:FBgn0003598 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_731779.1 Gene:Ravus / 41626 FlyBaseID:FBgn0038128 Length:359 Species:Drosophila melanogaster


Alignment Length:293 Identity:83/293 - (28%)
Similarity:120/293 - (40%) Gaps:84/293 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   809 ELQAKYDWLDPDANDENHCHCRVCDSRLPIKVFYLRQHDASRKHVENKERQRANAAAAANAPSVS 873
            |.||.|.||.||..|.:...|.||:.||..|...|.:|:.|.||.||  .||.:..|.||..|.:
  Fly    37 EYQAIYPWLLPDETDPHFVFCAVCECRLSCKRSDLGKHEGSIKHSEN--AQRKSLPAKANNSSFN 99

  Fly   874 PTST-----------------------VDAERQESGMDKESEND----------MSVRSDGSTAE 905
            .:|:                       .:.|.:|.|...|:|.|          :..::|..| |
  Fly   100 GSSSGAMKWEDTEDEEGLLQYGTDPQDDETEDEEEGELDETEGDCEDDEKRTQELEAQNDLET-E 163

  Fly   906 PLAKRSRRSME-------------------------------------VRRIIRALRDSMGK--- 930
            |:.|:.||:.|                                     ...:....|.::.|   
  Fly   164 PVIKQQRRTSETDSQNSGMLDYLPLHVTINEGPQSLPTTVSAYPTSSATATVAPPCRITIKKVPV 228

  Fly   931 RQEERSQMDMARDMICSSFDIVTRLRTLERESVAHNESMAQAPPSVTVSPIKPPEPRHVMDLFFD 995
            .....|.|..|:::  :|...:|.:.|....:....:|....|    :|||.|  ||..::||||
  Fly   229 HSTPLSGMCQAQEI--NSKATITPIHTTPSYAARPLQSYQLQP----LSPITP--PRDSLELFFD 285

  Fly   996 SISPTMKSLPPDLAAEGKSKIMQLVCSLELRAM 1028
            ||..|:|:|||.||.|||.::|||:..|||||:
  Fly   286 SICATVKNLPPKLATEGKIRVMQLIGELELRAL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-7NP_524342.3 BESS 991..1021 CDD:460758 19/29 (66%)
RavusNP_731779.1 BESS 278..312 CDD:460758 19/33 (58%)

Return to query results.
Submit another query.