DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8476 and dnj-3

DIOPT Version :10

Sequence 1:NP_731777.1 Gene:CG8476 / 41624 FlyBaseID:FBgn0038127 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_506711.1 Gene:dnj-3 / 182084 WormBaseID:WBGene00001021 Length:191 Species:Caenorhabditis elegans


Alignment Length:230 Identity:45/230 - (19%)
Similarity:84/230 - (36%) Gaps:72/230 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SQLRAENHYQVLNVPVGSSDREIKRAFIELSKKYHPD-----ANSQTR--------DSEVFMKIC 82
            |.:..:|:|:::.|...::.:||:.||::.:|:.|||     :.|.:|        ::|.||.:.
 Worm    12 SYIIRKNYYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVK 76

  Fly    83 EAYQTLHRVNSRQIYDSRLRMQNQNKSPQESTFTGRRVYTVWSQYQSAVRSKQMGRGSRRFGGVK 147
            |||..|.....|:.||  |....:.....|:|...:.:.|.....|.|                 
 Worm    77 EAYDVLRNEEKRKEYD--LAFSREGGFLMEATHKTQEMSTQRRNIQRA----------------- 122

  Fly   148 PTIFKGKIVSKWLPMTLVDLKREGLR------RSWHDKY---SFPNSPIFYLYVAGFCLVGGLVL 203
                      :|....:.|.||...:      |:..|:|   ...|..:..|......|:|..::
 Worm   123 ----------EWSADVIPDAKRNSKKVVYSHFRNPEDEYLREKQKNRMLVVLAATVMALIGANIV 177

  Fly   204 LDVISRFQEQSFVEKDIKILLSEKDLEASTITHPI 238
                       ::.|          |:|..::.|:
 Worm   178 -----------YIRK----------LQADRLSKPV 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8476NP_731777.1 DnaJ 37..98 CDD:395170 21/73 (29%)
dnj-3NP_506711.1 DnaJ 18..170 CDD:440252 38/180 (21%)
DnaJ_bact 19..>92 CDD:274090 20/72 (28%)

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