DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8476 and dnj-4

DIOPT Version :10

Sequence 1:NP_731777.1 Gene:CG8476 / 41624 FlyBaseID:FBgn0038127 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_491558.1 Gene:dnj-4 / 172173 WormBaseID:WBGene00001022 Length:274 Species:Caenorhabditis elegans


Alignment Length:230 Identity:61/230 - (26%)
Similarity:92/230 - (40%) Gaps:63/230 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CLATFGSRFTYQSQPMSQLRAENHYQVLNVPVGSSDREIKRAFIELSKKYHPDANSQTRDSEVFM 79
            |.|.|.::         ::|...||:||.|...::..|||.||...|||.|||.:|:...:..|:
 Worm    15 CQARFFNK---------KIRQRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFL 70

  Fly    80 KICEAYQTLHRVNSRQIYDSRL------------RMQNQNKSPQESTFTGRRVYTVWSQYQSAVR 132
            ::..||..|.|...|::||.:|            |.|..|.:||..  ..|...|.|||.....|
 Worm    71 ELKNAYDVLRRPADRRLYDYQLRGGGGRYPNGGQRYQYPNTAPQYD--FSRDWSTYWSQNPDNSR 133

  Fly   133 S--KQMGRGSRRFGGVKPTIFKGKIVSKWLPMTLVDLKREGLRRSWHDKYSFPNSPIFYLYVAGF 195
            |  ::..:.||.|         .|.:.||..:.||                         .|||:
 Worm   134 SSREERDKSSREF---------MKSIVKWTAIGLV-------------------------LVAGY 164

  Fly   196 CLVGGLVLLDVISRFQEQSFVEKD--IKILLSEKD 228
              .||.:.|...::.|....:::|  .|..|.:|:
 Worm   165 --NGGYLYLLAYNQKQLDKLIDEDEIAKCFLRQKE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8476NP_731777.1 DnaJ 37..98 CDD:395170 23/60 (38%)
dnj-4NP_491558.1 DnaJ 28..171 CDD:440252 51/180 (28%)
DnaJ 28..89 CDD:395170 23/60 (38%)

Return to query results.
Submit another query.