DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and crispld2

DIOPT Version :9

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001027499.1 Gene:crispld2 / 613091 XenbaseID:XB-GENE-985953 Length:500 Species:Xenopus tropicalis


Alignment Length:400 Identity:108/400 - (27%)
Similarity:146/400 - (36%) Gaps:125/400 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CEVAFACNGKIIAS----------------GITAEERSIILQEHNRLRQIVATGRYPGQ--PGAE 63
            |...||.|...:.:                .|...::..|:|.||:||         ||  |.|.
 Frog    21 CYCIFAPNSTFLENLLNKYKDTTPHSRTRRAILRTDKEEIIQLHNKLR---------GQVHPSAS 76

  Fly    64 NMREIVWDDELAARAQKWADNCQFRHDPHRTINRFTMGQNLAIIWSTAPLDADDGDFPSRIQSWF 128
            ||..:.|||||...|:.||:.|.:.|.|  |....::|||||:.|......|      ..:|||:
 Frog    77 NMEYMTWDDELEKSAEAWAEECIWEHGP--TALLMSIGQNLAVHWGRYRQPA------YHVQSWY 133

  Fly   129 NEVQKYSF-----------GDAWSPKTGHYSQLVWGETSLVGCGYAEYKDTSKY-----NKLY-V 176
            :||:.|::           .....|...||:|:||..|:.|||.....|..:.:     |.:| |
 Frog   134 DEVKDYTYPYPHECNPYCPERCSGPMCTHYTQIVWATTTKVGCAVNVCKRMNVWGDIWENAVYLV 198

  Fly   177 CNYGPGGNVVGYNPYEVGKPSCSTYGMKPSSRYQGLCAAPGSSPAANSV-------YGANTIETY 234
            |||.|.||.:|..||:.|:| ||.  ..||  |.|.|        .|::       ||...|.|.
 Frog   199 CNYSPKGNWIGEAPYKNGRP-CSE--CPPS--YGGNC--------QNNLCYKGDKHYGREGIVTN 250

  Fly   235 EYGYNSSPSSQTANNNPPTNNINKSQFSYNQPR--PKPVQTINPN-------------------- 277
            |......|      ...|..:..||    |:|:  ||..||...|                    
 Frog   251 EVETPRFP------EETPVWDHKKS----NKPKAVPKTTQTSTENLMTQAIKCATKMRDSCKGST 305

  Fly   278 -------PSPFNPQAAVPSASTFGG---SSFGSASRGGSHAYTTDPS------QSAGRYKHKLEA 326
                   |...|.:|.|     ||.   .|..|..|...|....|.|      ...||.:..:::
 Frog   306 CNRYKCPPGCINSKAKV-----FGTLFYDSMSSICRAAIHYGVIDNSGGLVDITRKGRLQFFVKS 365

  Fly   327 YRPSAAEFEK 336
            .|.|.....|
 Frog   366 TRNSVESISK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 SCP_euk 37..180 CDD:240180 53/161 (33%)
crispld2NP_001027499.1 SCP_euk 57..202 CDD:240180 53/161 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..281 7/24 (29%)
LCCL 289..373 CDD:128866 16/88 (18%)
LCCL 392..490 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8613
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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