DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and crisp1.3

DIOPT Version :9

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001008204.1 Gene:crisp1.3 / 493566 XenbaseID:XB-GENE-951048 Length:240 Species:Xenopus tropicalis


Alignment Length:227 Identity:68/227 - (29%)
Similarity:98/227 - (43%) Gaps:42/227 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMQPSAVLLTTIMIISCEVAFACNGKIIASGITAEERSIILQEHNRLRQIVATGRYPGQPGAENM 65
            ||...|:.:...|.::.|.|......|....:|..:  ||:..||..|:       ...|.|.||
 Frog     1 MMLIGALCIAAFMALAVESADPPFSSISTDNVTVTQ--IIINAHNNYRR-------NASPSARNM 56

  Fly    66 REIVWDDELAARAQKWADNCQFRHDP--HRTINRFTMGQNLAII-----WSTAPLDADDGDFPSR 123
            .::||:.:.|..|..||..|...|.|  .|||..|..|:||.:.     |..|            
 Frog    57 LKMVWNKDAAINAASWAATCSESHSPSDKRTIPGFGCGENLYMASYPASWEEA------------ 109

  Fly   124 IQSWFNEVQKYSFGDAWSPK-----TGHYSQLVWGETSLVGCGYAEYKDTSKYNKLYVCNYGPGG 183
            ::.|::|...:.:|  ..||     ||||:|::|..:.:|||. ..|...|.|...|||.|.|.|
 Frog   110 VKGWYSEYNDFQYG--VGPKSPGLVTGHYTQVMWYNSYMVGCS-VSYCPKSPYKYFYVCQYCPAG 171

  Fly   184 NV--VGYNPYEVGKPSCSTYGMKPSSRYQGLC 213
            |:  ....||:.| |.|:..   |::...|||
 Frog   172 NLDSTMSTPYKTG-PKCADC---PTACDNGLC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 SCP_euk 37..180 CDD:240180 47/154 (31%)
crisp1.3NP_001008204.1 CAP_CRISP 33..170 CDD:349402 49/160 (31%)
Crisp 187..240 CDD:369954 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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