DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8483 and scpr-A

DIOPT Version :10

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster


Alignment Length:256 Identity:63/256 - (24%)
Similarity:96/256 - (37%) Gaps:63/256 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLLTTIMIISCEVAF-----------ACNGK-IIASGITAEERSIILQEH--------NRLRQIV 51
            ::|..::.||..|.:           |||.| ..:.....:.|.:.::.|        |.||..|
  Fly     9 LILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNV 73

  Fly    52 ATGRYPGQPGAENMREIVWDDELAARAQKWADNCQFRHDPHRTINRFT-MGQNLAII-WSTAPLD 114
            |.|:..|.|.|..|.::.|.:||:..|......|:...|..|:..||. .|||.|:. :|.|..:
  Fly    74 AGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQYSGAETE 138

  Fly   115 ADDGD-FPSRIQSWFNE--------------------VQKYSFGDAWSPKTGHYSQLVWGETSLV 158
            ..|.: ....|::||.|                    |.|::.  |.:.|..|           |
  Fly   139 YTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVTKFTI--AVAEKNTH-----------V 190

  Fly   159 GCGYAEYKDTSKYNKLYVCNYGPGGNVVG---YNPYEVGKPSC-STYGMKPSSRYQGLCAA 215
            ||....:......:.:..||:.. .|:||   |.|.|.....| :.||  .:..|..||.|
  Fly   191 GCAAVRFSRDFYNHFVLTCNFAT-SNIVGQPVYTPGEKATTGCKNRYG--AAYDYPNLCYA 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 CAP_euk 37..180 CDD:349399 42/173 (24%)
scpr-ANP_650062.1 CAP_euk 59..212 CDD:349399 40/165 (24%)

Return to query results.
Submit another query.