DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and Crispld1

DIOPT Version :10

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001128435.1 Gene:Crispld1 / 316482 RGDID:1564813 Length:500 Species:Rattus norvegicus


Alignment Length:261 Identity:75/261 - (28%)
Similarity:112/261 - (42%) Gaps:58/261 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ITAEERSIILQEHNRLRQIVATGRYPGQPGAENMREIVWDDELAARAQKWADNCQFRHDPHRTIN 96
            ||..:...||..||:||..|       .|.|.||..:.||.||...|:.||:.|.:.|.|...:.
  Rat    57 ITDNDMQSILDLHNKLRSQV-------YPAASNMEYMTWDVELERSAESWAETCLWEHGPTSLLP 114

  Fly    97 RFTMGQNLAIIWSTAPLDADDGDF--PS-RIQSWFNEVQKYSFG-----DAW------SPKTGHY 147
              ::||||...|         |.:  |: .:|:|::||:.:|:.     |.:      .|...||
  Rat   115 --SIGQNLGAHW---------GRYRPPTFHVQAWYDEVRDFSYPYEHECDPYCPFRCSGPVCTHY 168

  Fly   148 SQLVWGETSLVGCGYAEYKDTSKYNKLY------VCNYGPGGNVVGYNPYEVGKPSCS----TYG 202
            :|:||..:|.:||......:.:.:.:::      ||||.|.||..|:.||:.||| ||    ::|
  Rat   169 TQVVWATSSRIGCAINLCHNMNIWGQIWPKAVYLVCNYSPKGNWWGHAPYKHGKP-CSACPPSFG 232

  Fly   203 MKPSSRYQGLCAAPGSSPAANSVYGANTIETYEYGYNSS--------PSSQTANNNPPTNNINKS 259
               ....:.||...||    :..|.....||.|.....|        ..|..:|.|...:....|
  Rat   233 ---GGCRENLCYKEGS----DQYYTPQEEETNEIERQESQVHDTHVRTRSDDSNRNDVISTQQMS 290

  Fly   260 Q 260
            |
  Rat   291 Q 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 CAP_euk 37..180 CDD:349399 46/162 (28%)
Crispld1NP_001128435.1 CAP_CRISPLD1 62..207 CDD:349407 46/162 (28%)
LCCL 291..375 CDD:128866 1/1 (100%)
LCCL 394..491 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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