DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and scl-20

DIOPT Version :9

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:228 Identity:68/228 - (29%)
Similarity:94/228 - (41%) Gaps:63/228 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CEVAFACNGKIIASGITAEERSIILQEHNRLRQIVATGRY-----PGQPGAENMREIVWDDELAA 76
            |:..|         |.||:..  |:..||.||..:|.|.|     | :|.|::|.::.||..||.
 Worm    16 CDFRF---------GPTAQRE--IVDFHNSLRSQLANGDYVVDGVP-KPPAKDMMKMKWDPILAG 68

  Fly    77 RAQKWADNCQFRHDPHRTINRFTMGQN----LAIIWSTAPLDAD--------DGDFPSRIQSWFN 129
            .|:..|..|     |....:...:|:|    ||.: ::..||..        :..|..|  .|.|
 Worm    69 MAKNNAATC-----PSLFTDSKMLGRNYYHRLANV-TSGSLDKYALFAVKKWERQFQER--GWKN 125

  Fly   130 EVQKYSFGDAWSPKTGH-----YSQLVWGETSLVGCGY----AEYKDTSKYNKLYV-CNYGPGGN 184
            : :...|||       |     .:|:||..|..||||.    ||.......||:.| |.|...||
 Worm   126 Q-EFRMFGD-------HRLLTSATQMVWATTRHVGCGVNICDAEKNLFGYRNKVVVICEYQSKGN 182

  Fly   185 VVGYNPYEVGKPSCSTYGMKPSS----RYQGLC 213
            :.|...|:.| |:||..   |:|    |..|||
 Worm   183 IHGLPIYKEG-PTCSAC---PASTKCERRSGLC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 SCP_euk 37..180 CDD:240180 48/169 (28%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 50/172 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161837
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 1 1.000 - - FOG0000604
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100188
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.680

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