DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8483 and scl-19

DIOPT Version :9

Sequence 1:	NP_650264.1	Gene:	CG8483 / 41623	FlyBaseID:	FBgn0038126	Length:	392	Species:	Drosophila melanogaster
Sequence 2:	NP_507654.2	Gene:	scl-19 / 191308	WormBaseID:	WBGene00013971	Length:	207	Species:	Caenorhabditis elegans

Alignment Length:	228	Identity:	59/228 - (25%)
Similarity:	91/228 - (39%)	Gaps:	45/228 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 VLLTTIMIISCEVAFACNGKIIASGITAEERSIILQEHNRLRQIVATGRYPG----QPGAENMRE 67
            :||..::.||     :.:|::..:|     |..:|..||:||..||.|.:..    :|.|.||..
Worm     3 LLLFLLLAIS-----SSSGQLSPNG-----RQQVLDFHNKLRSQVALGVFSANGTIKPPARNMER 57

  Fly    68 IVWDDELAARAQKWADNCQFRHDPHRTINRFTMGQNLAIIWSTAPLD----ADDGDFPSRIQSWF 128
            :.:..:....||.:..:|     |...  ...:|:|:.:.:.|..:|    :.|......:..|.
Worm    58 LTYGQQFERLAQDYVADC-----PDGL--EIPIGRNIGMNYYTTKVDETYNSMDEYVIDALNDWA 115

  Fly   129 NEVQKYSFGDAW------SPKTGHYSQLVWGETSLVGCGYAEYKDTSKYNKLYVCNYGPGGNVVG 187
            .|.|.    :.|      .......||:||..|..||||   .|.....|.:.||.|...||:||
Worm   116 EEFQV----NGWLSTIYNDTSISAASQMVWAGTKYVGCG---VKRCDPINVVVVCMYYQQGNLVG 173

  Fly   188 YNPYEVGKP--SCSTYGMKPS-----SRYQGLC 213
            ...|:.|.|  :|....:.|.     .|..|||
Worm   174 RPIYKEGPPCTACPPMRICPGQKECCDRVMGLC 206

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8483	NP_650264.1	SCP_euk	37..180	CDD:240180	39/156 (25%)
scl-19	NP_507654.2	SCP	21..167	CDD:214553	41/164 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160161832
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	1	1.000	-	-		FOG0000604
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100188
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.650