DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and scl-17

DIOPT Version :9

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:244 Identity:56/244 - (22%)
Similarity:84/244 - (34%) Gaps:63/244 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NGKIIASGITAEERSIILQEHNRLRQIVATGRYPGQ----PGAENMREIVWDDELAARAQKWADN 84
            |.:...||:..     .|..||..|..:|.|.|..:    ..|.|:.::.|:..:|..||..|:.
 Worm    16 NAQFDKSGVQQ-----TLDAHNEFRSSIAKGTYVTKGLLHAPATNIMKMKWNVTIATAAQNHANK 75

  Fly    85 CQFRHD-----------------PHRTINRFTMGQNLAIIWSTAPLDADDGDFPSRIQSWFNEVQ 132
            |...||                 ..:.:|.  :|...|..||:        ::..:  .|..:|.
 Worm    76 CPKGHDGPLEGVSGECMWSGHINASKGVNH--LGAVAAKAWSS--------EYTKK--GWETDVM 128

  Fly   133 KYSFGDAWSPKTGHYSQLVWGETSLVGCGYAEYKDTSKYN-KLYVCNYGPGGNVVGYNPYEVGKP 196
            ...|   ::...||...:.|.....||||....:....|. .:.||.|...|...|...||.| |
 Worm   129 SDEF---FNSGVGHAIIMTWYSQVNVGCGVKLCQKEGDYQLAIVVCKYWGEGQGNGKIMYESG-P 189

  Fly   197 SCSTYGMKPSS---RYQGLCAAP---------------GSSPAANSVYG 227
            :||  ...|::   :..|||.:.               .|.||...|.|
 Worm   190 TCS--ACPPNTTCDQATGLCDSKIPDIPEPIYKYDELVNSKPAYTVVMG 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 SCP_euk 37..180 CDD:240180 35/164 (21%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 35/168 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161836
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 1 1.000 - - FOG0000604
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100188
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.650

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