DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and r3hdml

DIOPT Version :10

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:206 Identity:64/206 - (31%)
Similarity:101/206 - (49%) Gaps:49/206 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ITAEERSIILQEHNRLRQIVATGRYPGQPGAENMREIVWDDELAARAQKWADNCQFRHDPHRTIN 96
            |:..:.|.:|..||::|..|.       |.|.||..:|||:.||..|:.||:.|::.|.|:: :.
 Frog    58 ISPRDMSALLDYHNQVRSKVF-------PPAANMEYMVWDERLAKSAESWANQCKWDHGPNQ-LM 114

  Fly    97 RFTMGQNLAIIWSTAPLDADDGDFPS---RIQSWFNEVQKYSFGDAWSPK----------TG--- 145
            |: :||||::         ..|.:.|   .::.|::|.|.|||.   .|:          ||   
 Frog   115 RY-IGQNLSV---------HSGRYRSIVDLVKGWYDERQHYSFP---HPRECNPSCPNKCTGAVC 166

  Fly   146 -HYSQLVWGETSLVGC------GYAEYKDTSKYNKLYVCNYGPGGNVVGYNPYEVGKPSCSTYGM 203
             ||:|:||..::.:||      ....:..|.:.....||||...||.:|..||::|:| ||  ..
 Frog   167 THYTQMVWASSNRIGCAVNICTNINVWGSTWRQASYLVCNYSIKGNWIGEAPYKLGRP-CS--AC 228

  Fly   204 KPSSRYQGLCA 214
            .||  |.|:|:
 Frog   229 PPS--YGGVCS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 CAP_euk 37..180 CDD:349399 48/165 (29%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 48/165 (29%)

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