DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8483 and crispld1a

DIOPT Version :9

Sequence 1:NP_650264.1 Gene:CG8483 / 41623 FlyBaseID:FBgn0038126 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_001920421.2 Gene:crispld1a / 100149104 ZFINID:ZDB-GENE-090612-1 Length:508 Species:Danio rerio


Alignment Length:282 Identity:89/282 - (31%)
Similarity:122/282 - (43%) Gaps:78/282 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ITAEERSIILQEHNRLRQIVATGRYPGQ--PGAENMREIVWDDELAARAQKWADNCQFRHDPHRT 94
            |||.:...||..||:||         ||  |.|.||..:|||:||...|::||:.|.:.|.|...
Zfish    62 ITASDMQAILDLHNKLR---------GQVYPPASNMEYMVWDNELERSAEEWAETCLWEHGPAGL 117

  Fly    95 INRFTMGQNLAIIWSTAPLDADDGDF---PSRIQSWFNEVQKYSFG-----------DAWSPKTG 145
            :.:  :||||.:.|         |.:   .|.:|:|::||:.|||.           ....|...
Zfish   118 LPQ--IGQNLGVHW---------GRYRPPTSHVQAWYDEVKDYSFPYPQECNPHCPFRCSGPVCT 171

  Fly   146 HYSQLVWGETSLVGCGYAEYKDTSKYNKLY------VCNYGPGGNVVGYNPYEVGKPSCSTYGMK 204
            ||:||||..:|.:||......:.:.:.:::      ||||.|.||..||.||:.| .|||  ...
Zfish   172 HYTQLVWATSSRIGCAINVCYNMNVWGQIWAKAVYLVCNYSPKGNWWGYAPYKHG-TSCS--ACP 233

  Fly   205 PSSRYQGLCAAPGSSPAANSVY---GANTIETYEYGYNSSPSSQTANNNPPTNNINKSQFSYNQP 266
            ||  |.|:|       ..|..|   |.|         ..|||.:|...    |:|.........|
Zfish   234 PS--YGGVC-------RENLCYKGDGKN---------RQSPSEETHER----NSIEPEAPHSPGP 276

  Fly   267 RPKPVQTINPNPSPF-NPQAAV 287
            |.:|       |||. :|.|.|
Zfish   277 RLRP-------PSPTRHPNAVV 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8483NP_650264.1 SCP_euk 37..180 CDD:240180 50/164 (30%)
crispld1aXP_001920421.2 SCP_euk 68..212 CDD:240180 50/163 (31%)
LCCL 298..381 CDD:128866
LCCL 401..500 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585646
Domainoid 1 1.000 81 1.000 Domainoid score I8420
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25860
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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