DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8141 and AT1G19310

DIOPT Version :10

Sequence 1:NP_731776.1 Gene:CG8141 / 41622 FlyBaseID:FBgn0038125 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_564078.1 Gene:AT1G19310 / 838513 AraportID:AT1G19310 Length:226 Species:Arabidopsis thaliana


Alignment Length:125 Identity:35/125 - (28%)
Similarity:55/125 - (44%) Gaps:31/125 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IPDLSNANVNQQQQQENDGEDDLLPGTRLRYRRRNLHLDPYVCNECNQYVRGGVITICGHLFCWT 107
            :|..|:.|........|                       :.||.|....:..::|:|||||||.
plant     4 VPSCSSGNDTNNNDSSN-----------------------FECNICLDLAQDPIVTLCGHLFCWP 45

  Fly   108 CLWPKLSGTAQPR-CPCCQRHLLMYED-IMPFHGEGPNARQEDNNVPAQPG-SVP-RPTG 163
            ||:..|...:|.: ||.|:  .::.|| ::|.:|.|.::  .|....:.|| .|| ||:|
plant    46 CLYKWLHLHSQSKDCPVCK--AVIEEDRLVPLYGRGKSS--ADPRSKSIPGLEVPNRPSG 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8141NP_731776.1 PLN03208 85..>155 CDD:178747 24/71 (34%)
AT1G19310NP_564078.1 rad18 21..>112 CDD:273165 31/85 (36%)
RING-HC_AtRMA-like 21..65 CDD:438403 18/45 (40%)

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