DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8141 and RMA3

DIOPT Version :10

Sequence 1:NP_731776.1 Gene:CG8141 / 41622 FlyBaseID:FBgn0038125 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_194477.2 Gene:RMA3 / 828856 AraportID:AT4G27470 Length:243 Species:Arabidopsis thaliana


Alignment Length:212 Identity:44/212 - (20%)
Similarity:78/212 - (36%) Gaps:75/212 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 CNECNQYVRGGVITICGHLFCWTCLWP----KLSGTA----QPRCPCCQRHLLMYEDIMPFHGEG 141
            ||.|.......|:|:|||||||.|::.    :||..:    |..||.|:.::.: ..::|.:|.|
plant    44 CNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITI-TSLVPLYGRG 107

  Fly   142 ---PNARQEDNNVPAQPGSVPRPTGLYLSDTDFPCWFAVNDPVDGCPATFPDIRRE--------- 194
               |::........|....:||.          |...|:.:|:....:..|.::.:         
plant   108 MSSPSSTFGSKKQDALSTDIPRR----------PAPSALRNPITSASSLNPSLQHQTLSPSFHNH 162

  Fly   195 ------------RDLHCAIRLIPMVYPWIG------------------AQ-------------IS 216
                        .||..|: ::..:||.||                  ||             ::
plant   163 QYSPRGFTTTESTDLANAV-MMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQSQRMMQREKSLN 226

  Fly   217 FLKWFQLGCVLLIFLIW 233
            .:..|.|.|::|..|::
plant   227 RVSIFFLCCIILCLLLF 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8141NP_731776.1 PLN03208 85..>155 CDD:178747 24/80 (30%)
RMA3NP_194477.2 PLN03208 37..228 CDD:178747 39/195 (20%)

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