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Protein Alignment CG8141 and RMA1
DIOPT Version :9
Sequence 1: | NP_731776.1 |
Gene: | CG8141 / 41622 |
FlyBaseID: | FBgn0038125 |
Length: | 239 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001319862.1 |
Gene: | RMA1 / 825654 |
AraportID: | AT4G03510 |
Length: | 249 |
Species: | Arabidopsis thaliana |
Alignment Length: | 116 |
Identity: | 39/116 - (33%) |
Similarity: | 56/116 - (48%) |
Gaps: | 19/116 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 CNECNQYVRGGVITICGHLFCWTCL--WPKLSGTA-------QPRCPCCQRHLLMYEDIMPFHGE 140
||.|...|:..|:|:|||||||.|: |..:...: ..:||.| :..:.:..::|.:|.
plant 48 CNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVC-KSKVSHSTLVPLYGR 111
Fly 141 GPNARQED--NNVPAQP-GSVPR---PTGLYLSDTDFPCWFAV--NDPVDG 183
|....||: |:||.:| |.|.| |...|.| ||......| |.|.:|
plant 112 GRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYAS-TDLRLSQRVHFNSPQEG 161
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG8141 | NP_731776.1 |
zf-C3HC4_2 |
85..124 |
CDD:290634 |
17/47 (36%) |
RMA1 | NP_001319862.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5574 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000717 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR12313 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
5 | 4.870 |
|
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