DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8141 and AT2G23780

DIOPT Version :9

Sequence 1:NP_731776.1 Gene:CG8141 / 41622 FlyBaseID:FBgn0038125 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001318276.1 Gene:AT2G23780 / 816910 AraportID:AT2G23780 Length:227 Species:Arabidopsis thaliana


Alignment Length:84 Identity:30/84 - (35%)
Similarity:47/84 - (55%) Gaps:6/84 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YVCNECNQYVRGGVITICGHLFCWTCLWPKLSGTAQPR-CPCCQRHLLMYEDIMPFHGEGPNARQ 146
            :.||.|.:..:..::|:|||||||.||:..|...:..: ||.| :.::..:.::|.:|.|.|  |
plant    26 FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVC-KAVVQDDKLVPLYGRGKN--Q 87

  Fly   147 EDNNVPAQPG-SVP-RPTG 163
            .|......|| .:| ||||
plant    88 TDPRSKRYPGLRIPNRPTG 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8141NP_731776.1 zf-C3HC4_2 85..124 CDD:290634 16/39 (41%)
AT2G23780NP_001318276.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5574
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000717
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12313
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

Return to query results.
Submit another query.