DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8141 and rnf5

DIOPT Version :10

Sequence 1:NP_731776.1 Gene:CG8141 / 41622 FlyBaseID:FBgn0038125 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001017071.1 Gene:rnf5 / 549825 XenbaseID:XB-GENE-974969 Length:168 Species:Xenopus tropicalis


Alignment Length:140 Identity:41/140 - (29%)
Similarity:59/140 - (42%) Gaps:35/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YVCNECNQYVRGGVITICGHLFCWTCL--WPKLSGTAQPRCPCCQRHLLMYEDIMPFHGEGPNAR 145
            |.||.|.:..|..|:::||||:||.||  |.:.....| .||.|:.. :..|.::|.:|.| ::.
 Frog    12 YECNICLETAREPVVSVCGHLYCWPCLHQWLETRPDRQ-ECPVCKAG-ISREKVIPIYGRG-DSN 73

  Fly   146 QEDNNVPAQP---GSVPRP-------------TGLYLS--DTDFPCWFAVNDPVDGCPATFPDIR 192
            |:|..:...|   |..|.|             ||.::|  ...||..|            |..:.
 Frog    74 QKDPRLKTPPRPQGQRPEPENRAGGGVPGFTDTGFHMSFGIGAFPFGF------------FTTVF 126

  Fly   193 RERDLHCAIR 202
            ...|||.|.|
 Frog   127 NTNDLHSAPR 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8141NP_731776.1 PLN03208 85..>155 CDD:178747 24/71 (34%)
rnf5NP_001017071.1 RING-HC_RNF5 12..65 CDD:438401 20/54 (37%)

Return to query results.
Submit another query.