DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8141 and sordd2

DIOPT Version :10

Sequence 1:NP_731776.1 Gene:CG8141 / 41622 FlyBaseID:FBgn0038125 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_727898.2 Gene:sordd2 / 318098 FlyBaseID:FBgn0052581 Length:283 Species:Drosophila melanogaster


Alignment Length:285 Identity:70/285 - (24%)
Similarity:103/285 - (36%) Gaps:103/285 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EAVARENDPPNHCYINEEVPANETA-----ENPSHGLQGEVISKGYIPDL----------SNANV 51
            |.:|.|:.......:...:|.|.||     .|.|:...|:.:|.|...||          ::...
  Fly    43 EPLAEESSTSQLRPLGTSIPTNSTASELKKSNTSYSFTGDYLSGGNKADLKGGYPFGGTDTDTKA 107

  Fly    52 NQQQQQENDGEDDLLPGTRLRYRRRNLHLDPYVCNECNQYVRGGVITICGHLFCWTCL--WPKLS 114
            |::.:::....||.|                |.||.|....:..|:::|||||||.||  | .|:
  Fly   108 NEKDKEKEHTADDSL----------------YECNICLDTAKDAVVSMCGHLFCWPCLHQW-LLT 155

  Fly   115 GTAQPRCPCCQRHLLMYEDIMPFHGEGPNARQED--NNVPAQPGSVPRPTGLYLSDTDFPCWFAV 177
            ...:..||.| :..:..:.::|.:|.. :..|||  |.||      |||.|.....         
  Fly   156 RPNRKLCPVC-KAAVDKDKVIPLYGRN-STHQEDPRNKVP------PRPAGQRTEP--------- 203

  Fly   178 NDPVDGCP--------------ATFP-----------------DIRRERDLHCAIRLIPMVYPWI 211
             |||.|.|              ..||                 ||||   ||       ...|| 
  Fly   204 -DPVPGFPGFGFGDGFHMSFGIGAFPFGFITSRLNFFEPRPPADIRR---LH-------EDEPW- 256

  Fly   212 GAQISFLKWFQLGCVLLIFLIWSVL 236
              .:|.|.|.     .::|:|:.:|
  Fly   257 --ALSKLFWH-----FVVFVIYGLL 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8141NP_731776.1 PLN03208 85..>155 CDD:178747 26/73 (36%)
sordd2NP_727898.2 RING-HC_RNF185 123..179 CDD:438402 20/57 (35%)

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