DRSC/TRiP Functional Genomics Resources

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Protein Alignment MCAM and beat-VII

DIOPT Version :9

Sequence 1:NP_006491.2 Gene:MCAM / 4162 HGNCID:6934 Length:646 Species:Homo sapiens
Sequence 2:NP_733162.2 Gene:beat-VII / 43213 FlyBaseID:FBgn0250908 Length:517 Species:Drosophila melanogaster


Alignment Length:173 Identity:44/173 - (25%)
Similarity:69/173 - (39%) Gaps:31/173 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   331 LLSEPQELLVNYVSDVRVSPAAPERQE-GSSLTLTCEAESSQDLEFQ--WLREETGQVLE----R 388
            ||...|...:|..|||.|:...|...| |||.|..|......::.|:  ||:.:.|:..|    |
  Fly    10 LLGLQQTKPINGQSDVLVNLVVPRYVERGSSATFKCTHNVRPEILFKVTWLKVDKGKFFEFINGR 74

Human   389 GPVLQ--------------------LHDLKREAGGGYRCVAS--VPSIPGLNRTQLVNVAI--FG 429
            .|..:                    |.|::.:..|.:.|..|  .|.....:..:|::|.:  .|
  Fly    75 NPPFRNSTIEGAEIDWDNSNEQQVTLKDVQFDLSGQFYCEVSTDTPIFTKASADELMSVFLPQTG 139

Human   430 PPWMAFKERKVWVKENMVLNLSCEASGHPRPTISWNVNGTASE 472
            ||.:.|::|..:.....:..|.....|.|.|.|:|.:||...|
  Fly   140 PPTIKFRKRTPFAVGEKLFALCNTTRGRPAPHITWLINGKKVE 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MCAMNP_006491.2 Ig 33..117 CDD:325142
C2-set_2 139..234 CDD:311910
Ig_3 261..321 CDD:316449
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..299
Ig_3 346..410 CDD:316449 20/90 (22%)
Ig 450..510 CDD:325142 9/23 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..554
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 620..646
beat-VIINP_733162.2 Ig 31..118 CDD:299845 19/86 (22%)
IG_like 34..118 CDD:214653 18/83 (22%)
Ig 141..>183 CDD:299845 12/42 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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