Sequence 1: | NP_001262529.1 | Gene: | 2mit / 41616 | FlyBaseID: | FBgn0260793 | Length: | 1155 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001018583.1 | Gene: | lrrc4ca / 553785 | ZFINID: | ZDB-GENE-050522-533 | Length: | 647 | Species: | Danio rerio |
Alignment Length: | 672 | Identity: | 158/672 - (23%) |
---|---|---|---|
Similarity: | 239/672 - (35%) | Gaps: | 156/672 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 147 LDLGNNSLEVIPLSLADTNMSLPFVTLDLSC-NKFSQ-ISTSFFAQRLP-----QLKNLNLAHNE 204
Fly 205 LLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVS 269
Fly 270 LSIAYNPDVGVAMQEFVASWSLKELDASGTGLCQVPAALAQSVRTLKLSDNWLKAINCGDMDSY- 333
Fly 334 ----PLLQYLDLSH-SRIAQVEDDALGRLELLESLFLDRNLLMRVPSSLP-PSLEHLFLQHNQIM 392
Fly 393 ELPPQAFVGLVNLQTLDLSNNRLIFLPPLS---LPKLLTLNLESSGVESVSQSIVHTLPQLRDLL 454
Fly 455 LEDNPIKCS-DLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYL------QFHNFYENFSSRE 512
Fly 513 CGIRKPENDTKPPSCSLTRASATLTTTPRSMSKVEKSQEAQATATSVEVAAATAATSEKTG---- 573
Fly 574 IQATSAAQSTAAAT----TAEREAIA---TATSSDTTATPTLAAAAAIQSAGNIPAQLTTKTLRP 631
Fly 632 TETTSLAQLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILA-------TRDAATATTEIN 689
Fly 690 SDKPTNISGATKTVATSAAEI-----------------ATPPAIEVPQTILAGKKSDKMPADKAH 737
Fly 738 ETLLKYPTRDTSGQVATTPHKH 759 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
2mit | NP_001262529.1 | LRR_RI | 124..355 | CDD:238064 | 58/220 (26%) |
leucine-rich repeat | 124..143 | CDD:275380 | |||
leucine-rich repeat | 144..167 | CDD:275380 | 7/19 (37%) | ||
leucine-rich repeat | 172..194 | CDD:275380 | 8/28 (29%) | ||
LRR_8 | 193..253 | CDD:290566 | 23/64 (36%) | ||
leucine-rich repeat | 195..218 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 219..242 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 241..301 | CDD:290566 | 14/59 (24%) | ||
leucine-rich repeat | 243..311 | CDD:275380 | 13/67 (19%) | ||
leucine-rich repeat | 312..335 | CDD:275380 | 4/27 (15%) | ||
LRR_8 | 334..415 | CDD:290566 | 26/82 (32%) | ||
leucine-rich repeat | 336..359 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 360..380 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 379..460 | CDD:290566 | 21/83 (25%) | ||
LRR_4 | 379..>415 | CDD:289563 | 12/35 (34%) | ||
leucine-rich repeat | 381..404 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 405..449 | CDD:275380 | 9/46 (20%) | ||
lrrc4ca | NP_001018583.1 | LRRNT | 48..81 | CDD:214470 | 9/38 (24%) |
LRR | <78..288 | CDD:227223 | 66/259 (25%) | ||
leucine-rich repeat | 79..102 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 103..126 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 127..150 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 151..174 | CDD:275380 | 8/48 (17%) | ||
leucine-rich repeat | 175..199 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 200..221 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 246..269 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 270..291 | CDD:275380 | 4/20 (20%) | ||
LRRCT | 302..>340 | CDD:214507 | 12/39 (31%) | ||
IG | 361..443 | CDD:214652 | 14/81 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |