DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 2mit and kek6

DIOPT Version :9

Sequence 1:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster


Alignment Length:701 Identity:144/701 - (20%)
Similarity:237/701 - (33%) Gaps:184/701 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 IPDLVSLSIAYNPDVGVAMQEFVASWS--LKELDASGTGLCQVPAALAQSVRTLKLSDNWLKAIN 326
            :.|..|||.|.|         ....|:  .|....|...|..:|..|:..::.|.|:||.:..:|
  Fly    30 VADDWSLSCASN---------CTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDNHIPYLN 85

  Fly   327 CGDMDSYPL--LQYLDLSHSRIAQVEDDALGRLELLESLFLDRNLLMRVPSSL---PPSLEHLFL 386
            ..:..:..|  ||.:.|..|.:..:..::...|::|..:.|..|.|..:....   ...|..|:|
  Fly    86 REEFSTLGLLNLQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYL 150

  Fly   387 QHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLPPLSLPKLLT---LNLESSGVESVSQSIVHTLP 448
            ..|.:..|....|..|.:|:|||:.:..:.::.|:||..|..   |||:::.:||:|:.:...:.
  Fly   151 NGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLLESLSEYVFQHMA 215

  Fly   449 QLRDLLLEDNPIKCS-DLLGIAEW-----------------ASPCRSVDAGQSNGASVSGRVDL- 494
            .|:.|.||:||.:|: .|.....|                 |...|:.|:..........||:: 
  Fly   216 NLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVSLVCKGPPAQKDRTWDSVDDELFGCPPRVEIF 280

  Fly   495 KTEYLQFHNFYEN--FSSRECGIRKPE-----------NDT---KPPSCSLTRASATLT------ 537
            ..|.:|..:...|  ||....|...||           ||.   :..|.:..:..:.||      
  Fly   281 NNEEVQNIDIGSNTTFSCLVYGDPLPEVAWELNGKILDNDNVLFESESIASDKLWSNLTVFNVTS 345

  Fly   538 --------TTPRSMSKVEKSQEAQATATSVEVAAATAATSEKT-----------GIQAT------ 577
                    |...|:..:.::       .|:.::.......|||           ||..|      
  Fly   346 LDAGTYACTGSNSIGSMTQN-------ISIYLSEIVQHVLEKTPETFWYFGLIMGIFGTVFLLIS 403

  Fly   578 --------------------SAAQSTAAATTAEREAIATATSSDTTAT------------PTLAA 610
                                :..:|:.:....|::.:   .||.||.|            ||...
  Fly   404 ISFVVCLCKRTTRQHRHANKAGVKSSVSFNDQEKKLL---DSSVTTTTNDRGDSYGIDNQPTSIG 465

  Fly   611 AAAIQSAGNIPAQLTTKTLRPTETTSLAQLQRRQQMP-----GMPAKTTETPAKNLPSLAQTKAT 670
            .....|||....|:....:......|:...|:.||..     ||..:           |.|.|.:
  Fly   466 MNKGDSAGMGFNQIEIHAVESHRHGSMLVQQQPQQQQVAGGGGMRQQ-----------LMQVKDS 519

  Fly   671 T----ALPILATRDAATATTEINSDKPTNISGATKTVATSAAEIATPPA--------IEVPQTIL 723
            |    ::|......|.:...:|:.:.|.|: |.........:.|...||        :.|.|.:|
  Fly   520 TCGMMSVPTSMAGHAHSHPAQISEEFPLNV-GVFPPPPEFCSNIVPNPAFGGNIFIRVSVTQDML 583

  Fly   724 AGKKSDKMPADKAHETLLKYPTR------DTSGQVATTPHKHATLQLHVKDRHLIGTPLLMHKGD 782
            .|...:..|      .||..|.|      ..:|.||....:.|||..|...|.::       |.|
  Fly   584 DGADLNMYP------DLLNIPKRMQDVQESGAGAVAVPEGQFATLPRHTARRGIL-------KKD 635

  Fly   783 VLLVDAEQLLLPGTATVADADSEVLDPSQQHQSAEQEKHQSATDKRQADAI 833
            ..|...:|         ...........||.|..:|::||....:.|...:
  Fly   636 TSLQQQQQ---------QHQQQHQHQQQQQQQQIQQQQHQQLQQQHQPSGL 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
2mitNP_001262529.1 LRR_RI 124..355 CDD:238064 22/94 (23%)
leucine-rich repeat 124..143 CDD:275380
leucine-rich repeat 144..167 CDD:275380
leucine-rich repeat 172..194 CDD:275380
LRR_8 193..253 CDD:290566
leucine-rich repeat 195..218 CDD:275380
leucine-rich repeat 219..242 CDD:275380
LRR_8 241..301 CDD:290566 9/38 (24%)
leucine-rich repeat 243..311 CDD:275380 12/48 (25%)
leucine-rich repeat 312..335 CDD:275380 5/22 (23%)
LRR_8 334..415 CDD:290566 21/85 (25%)
leucine-rich repeat 336..359 CDD:275380 5/22 (23%)
leucine-rich repeat 360..380 CDD:275380 4/22 (18%)
LRR_8 379..460 CDD:290566 26/83 (31%)
LRR_4 379..>415 CDD:289563 11/35 (31%)
leucine-rich repeat 381..404 CDD:275380 7/22 (32%)
leucine-rich repeat 405..449 CDD:275380 14/46 (30%)
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 6/24 (25%)
LRR_8 96..155 CDD:290566 13/58 (22%)
leucine-rich repeat 97..120 CDD:275380 5/22 (23%)
leucine-rich repeat 121..144 CDD:275380 4/22 (18%)
LRR_4 144..186 CDD:289563 12/41 (29%)
leucine-rich repeat 145..168 CDD:275380 7/22 (32%)
leucine-rich repeat 169..216 CDD:275380 14/46 (30%)
LRRCT 225..274 CDD:214507 8/48 (17%)
Ig 295..367 CDD:143165 12/78 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453528
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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