DRSC/TRiP Functional Genomics Resources

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Protein Alignment 2mit and CG18249

DIOPT Version :10

Sequence 1:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster


Alignment Length:403 Identity:105/403 - (26%)
Similarity:165/403 - (40%) Gaps:74/403 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 ITAMDLSSNQLESLSLDNFN---QLRQLDLGNNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQIS 184
            :|::.:....|..|....||   :|..|.|..|.:..:.::.......|..  |.|..|..::|.
  Fly   105 LTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQGLSKLRL--LGLQGNAIAEIL 167

  Fly   185 TSFFAQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLS 249
            :|.. ..|.:|.:|:|:.|||..:.:..|....:||||:|:.|.:..:..:...:||||:.|||.
  Fly   168 SSTL-DPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDVLGSLPNLRLLDLG 231

  Fly   250 HNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTGLCQVPAALAQSVRT 314
            |..........|..:.:||.        .|.::...|.:....:|.|....|..:......||..
  Fly   232 HAAELEVMTLNLTNVQNLVL--------EGSSLSSLVINGGFIKLQAGNNELNHLQVGNKSSVIE 288

  Fly   315 LKLSDNWLKAINCGDMDSYPL------LQYLDLSHSRIAQVED-----DALGRLELLESLFLDRN 368
            :.|..|.|..     .|:..|      ||.||||.:||..:..     ||.|..|||        
  Fly   289 MDLHGNLLNG-----NDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDASGTQELL-------- 340

  Fly   369 LLMRVPSSLPPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLPPL---SLPKLLTLN 430
                    :.|||:.|.|.:||::.|||::.:....|..||||:|.::.|...   ||..|..|.
  Fly   341 --------ILPSLKFLNLANNQLVRLPPESPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKGLY 397

  Fly   431 LESSGVESVSQSIVH-TLPQLRDLLLEDNPIKCSDLLGIAEWASPCRS------VDAG------- 481
            :|.:.:.:::...:| ..|.|.:|.|.|||           |:|....      .|.|       
  Fly   398 VEGNRLNTINYQKLHEEHPDLSELGLHDNP-----------WSSGLYRKMFLYFTDRGVHLQARP 451

  Fly   482 QSNGASVSGRVDL 494
            |:...:.|.|||:
  Fly   452 QNRVLNKSSRVDI 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
2mitNP_001262529.1 LRR <106..458 CDD:443914 93/352 (26%)
leucine-rich repeat 124..143 CDD:275380 5/21 (24%)
leucine-rich repeat 144..167 CDD:275380 4/22 (18%)
leucine-rich repeat 172..194 CDD:275380 6/21 (29%)
leucine-rich repeat 195..218 CDD:275380 7/22 (32%)
leucine-rich repeat 219..242 CDD:275380 7/22 (32%)
leucine-rich repeat 243..311 CDD:275380 13/67 (19%)
leucine-rich repeat 312..335 CDD:275380 5/22 (23%)
leucine-rich repeat 336..359 CDD:275380 11/27 (41%)
leucine-rich repeat 360..380 CDD:275380 1/19 (5%)
leucine-rich repeat 381..404 CDD:275380 8/22 (36%)
leucine-rich repeat 405..449 CDD:275380 13/47 (28%)
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380
LRR 105..433 CDD:443914 98/370 (26%)
leucine-rich repeat 105..128 CDD:275380 5/22 (23%)
leucine-rich repeat 129..152 CDD:275380 4/22 (18%)
leucine-rich repeat 153..176 CDD:275380 7/25 (28%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
leucine-rich repeat 201..224 CDD:275380 7/22 (32%)
leucine-rich repeat 225..258 CDD:275380 9/40 (23%)
leucine-rich repeat 259..310 CDD:275380 11/55 (20%)
leucine-rich repeat 311..344 CDD:275380 14/48 (29%)
leucine-rich repeat 345..368 CDD:275380 8/22 (36%)
leucine-rich repeat 369..390 CDD:275380 7/20 (35%)
leucine-rich repeat 393..417 CDD:275380 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.

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