DRSC/TRiP Functional Genomics Resources

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Protein Alignment 2mit and ECM2

DIOPT Version :9

Sequence 1:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001384.1 Gene:ECM2 / 1842 HGNCID:3154 Length:699 Species:Homo sapiens


Alignment Length:347 Identity:91/347 - (26%)
Similarity:141/347 - (40%) Gaps:90/347 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 ELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAM 282
            ::.:|.|:.|:|:.|..|.|..||||:.||||.|.::.|                      |:..
Human   344 QITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNITSS----------------------GIGP 386

  Fly   283 QEFVASWSLKELDASGTGLCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRI- 346
            :.|.....|..|:..|..|.|:|:.|..::..||:::|.|:||:...:.....|..|:|..:.: 
Human   387 KAFKLLKKLMRLNMDGNNLIQIPSQLPSTLEELKVNENNLQAIDEESLSDLNQLVTLELEGNNLS 451

  Fly   347 -AQVEDDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIME----------------- 393
             |.|...|...|:.|..|.|.:|....:|..||.|:|.|:|::|||.|                 
Human   452 EANVNPLAFKPLKSLAYLRLGKNKFRIIPQGLPGSIEELYLENNQIEEITEICFNHTRKINVIVL 516

  Fly   394 ---------LPPQAFVGLVNLQTLDLSNNRLIFLPPLSLPK-LLTLNLESSGVESVSQSIV-HTL 447
                     :.|.|::...||:::|||.|:|..:|.. ||| ||.|.|..:.:|.:...:. |..
Human   517 RYNKIEENRIAPLAWINQENLESIDLSYNKLYHVPSY-LPKSLLHLVLLGNQIERIPGYVFGHME 580

  Fly   448 PQLRDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYLQFHNFYENFSSRE 512
            |.|..|.|..|.:                 .|.|          :|..:.|..:|:..|.|..  
Human   581 PGLEYLYLSFNKL-----------------ADDG----------MDRVSFYGAYHSLRELFLD-- 616

  Fly   513 CGIRKPENDTK--PPSCSLTRA 532
                  .||.|  ||.....:|
Human   617 ------HNDLKSIPPGIQEMKA 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
2mitNP_001262529.1 LRR_RI 124..355 CDD:238064 38/138 (28%)
leucine-rich repeat 124..143 CDD:275380
leucine-rich repeat 144..167 CDD:275380
leucine-rich repeat 172..194 CDD:275380
LRR_8 193..253 CDD:290566 16/34 (47%)
leucine-rich repeat 195..218 CDD:275380 91/347 (26%)
leucine-rich repeat 219..242 CDD:275380 8/22 (36%)
LRR_8 241..301 CDD:290566 14/59 (24%)
leucine-rich repeat 243..311 CDD:275380 16/67 (24%)
leucine-rich repeat 312..335 CDD:275380 6/22 (27%)
LRR_8 334..415 CDD:290566 30/108 (28%)
leucine-rich repeat 336..359 CDD:275380 7/24 (29%)
leucine-rich repeat 360..380 CDD:275380 7/19 (37%)
LRR_8 379..460 CDD:290566 32/108 (30%)
LRR_4 379..>415 CDD:289563 16/61 (26%)
leucine-rich repeat 381..404 CDD:275380 9/48 (19%)
leucine-rich repeat 405..449 CDD:275380 16/45 (36%)
ECM2NP_001384.1 VWC 103..157 CDD:278520
Amnionless <116..>213 CDD:317263
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..316
Cell attachment site. /evidence=ECO:0000255 294..296
NEL <320..>572 CDD:330839 72/250 (29%)
leucine-rich repeat 321..344 CDD:275380 91/347 (26%)
leucine-rich repeat 345..368 CDD:275380 8/22 (36%)
LRR 1 368..388 9/41 (22%)
leucine-rich repeat 369..394 CDD:275380 9/46 (20%)
LRR 2 394..415 7/20 (35%)
leucine-rich repeat 395..415 CDD:275380 7/19 (37%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
LRR 3 416..436 6/19 (32%)
LRR 4 439..459 5/19 (26%)
leucine-rich repeat 440..465 CDD:275380 7/24 (29%)
LRR 5 465..484 5/18 (28%)
leucine-rich repeat 466..486 CDD:275380 7/19 (37%)
LRR 6 486..507 8/20 (40%)
leucine-rich repeat 487..510 CDD:275380 7/22 (32%)
LRR 491..>673 CDD:227223 42/178 (24%)
LRR 7 510..530 1/19 (5%)
leucine-rich repeat 511..536 CDD:275380 2/24 (8%)
LRR 8 536..557 10/21 (48%)
LRR 9 558..578 5/19 (26%)
LRR 10 582..602 7/46 (15%)
leucine-rich repeat 583..606 CDD:275380 8/49 (16%)
LRR 11 609..630 7/28 (25%)
leucine-rich repeat 610..632 CDD:275380 7/29 (24%)
LRR 12 632..653 1/1 (100%)
leucine-rich repeat 633..653 CDD:275380 91/347 (26%)
LRR 13 661..684
leucine-rich repeat 662..687 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40317
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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