DRSC/TRiP Functional Genomics Resources

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Protein Alignment 2mit and egg-6

DIOPT Version :9

Sequence 1:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_492348.1 Gene:egg-6 / 172670 WormBaseID:WBGene00010621 Length:961 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
2mitNP_001262529.1 LRR_RI 124..355 CDD:238064
leucine-rich repeat 124..143 CDD:275380
leucine-rich repeat 144..167 CDD:275380
leucine-rich repeat 172..194 CDD:275380
LRR_8 193..253 CDD:290566
leucine-rich repeat 195..218 CDD:275380
leucine-rich repeat 219..242 CDD:275380
LRR_8 241..301 CDD:290566
leucine-rich repeat 243..311 CDD:275380
leucine-rich repeat 312..335 CDD:275380
LRR_8 334..415 CDD:290566
leucine-rich repeat 336..359 CDD:275380
leucine-rich repeat 360..380 CDD:275380
LRR_8 379..460 CDD:290566
LRR_4 379..>415 CDD:289563
leucine-rich repeat 381..404 CDD:275380
leucine-rich repeat 405..449 CDD:275380
egg-6NP_492348.1 LRR_8 107..162 CDD:290566
leucine-rich repeat 107..127 CDD:275380
leucine-rich repeat 128..151 CDD:275380
LRR_RI <144..281 CDD:238064
leucine-rich repeat 152..200 CDD:275380
LRR_8 176..233 CDD:290566
leucine-rich repeat 201..224 CDD:275380
LRR_8 225..283 CDD:290566
leucine-rich repeat 225..248 CDD:275380
LRR_RI <240..458 CDD:238064
leucine-rich repeat 249..272 CDD:275380
LRR_8 271..329 CDD:290566
leucine-rich repeat 273..294 CDD:275380
leucine-rich repeat 295..318 CDD:275380
LRR_8 317..375 CDD:290566
leucine-rich repeat 319..342 CDD:275380
leucine-rich repeat 343..366 CDD:275380
LRR_8 365..425 CDD:290566
leucine-rich repeat 367..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 415..434 CDD:275380
leucine-rich repeat 437..449 CDD:275378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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