Sequence 1: | NP_524340.2 | Gene: | sim / 41612 | FlyBaseID: | FBgn0004666 | Length: | 688 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001153057.1 | Gene: | sim1b / 566656 | ZFINID: | ZDB-GENE-041210-5 | Length: | 586 | Species: | Danio rerio |
Alignment Length: | 666 | Identity: | 299/666 - (44%) |
---|---|---|---|
Similarity: | 369/666 - (55%) | Gaps: | 115/666 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 MKEKSKNAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGEAWG 89
Fly 90 SSPAMQRGAT-IKELGSHL--------LQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGN 145
Fly 146 SIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSHTIEIEKTFFL 210
Fly 211 RMKCVLAKRNAGLTTSGFKVIHCSGYLKARIYPDRGDGQGSLIQNLGLVAVGHSLPSSAITEIKL 275
Fly 276 HQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTT 340
Fly 341 KYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREVKDLVLNEIQTGVVKREPISP 405
Fly 406 AAQAAQAAQAAQAAQAAQAAQAAHVAQAVQAQVVVVPQQS-------VVVQPQCAGATGQPVGPG 463
Fly 464 TPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSSSSSNNNNGVW-------HHHHVQQQQQS 521
Fly 522 GSMDHDSLSYTQLYPPLNDLVVSSSSSVGGGTASSAGGGSSASASSSGVYSTEMQYPDTTTGNLY 586
Fly 587 YNNNNHYYYDYDATVDVATSMIRPFSANSNSCSSSSESERQLSTGNASI-VNETSPSQTTYS--- 647
Fly 648 DLSHNFELSYFSDNSS 663 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sim | NP_524340.2 | HLH | 26..78 | CDD:238036 | 44/51 (86%) |
PAS | 102..215 | CDD:279347 | 64/120 (53%) | ||
PAS | 102..163 | CDD:214512 | 53/68 (78%) | ||
PAS | 278..376 | CDD:238075 | 74/97 (76%) | ||
PAS_3 | 291..377 | CDD:285623 | 63/85 (74%) | ||
sim1b | NP_001153057.1 | HLH | 2..52 | CDD:238036 | 42/49 (86%) |
PAS | 92..>149 | CDD:279347 | 47/56 (84%) | ||
PAS | 92..148 | CDD:214512 | 47/55 (85%) | ||
PAS | 237..336 | CDD:238075 | 74/98 (76%) | ||
PAS_3 | 251..337 | CDD:285623 | 63/85 (74%) | ||
SIM_C | 357..>498 | CDD:284122 | 34/189 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 140 | 1.000 | Domainoid score | I4708 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3558 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 469 | 1.000 | Inparanoid score | I1488 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 1 | 1.000 | - | - | otm24682 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106200 | |
Panther | 1 | 1.100 | - | - | O | PTHR23043 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2563 |
SonicParanoid | 1 | 1.000 | - | - | X501 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.850 |