Sequence 1: | NP_524340.2 | Gene: | sim / 41612 | FlyBaseID: | FBgn0004666 | Length: | 688 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101111.1 | Gene: | Sim1 / 309888 | RGDID: | 1309949 | Length: | 765 | Species: | Rattus norvegicus |
Alignment Length: | 733 | Identity: | 318/733 - (43%) |
---|---|---|---|
Similarity: | 384/733 - (52%) | Gaps: | 167/733 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 MKEKSKNAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGEAWG 89
Fly 90 ----SSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIFEY 150
Fly 151 IHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSHTIEIEKTFFLRMKCV 215
Fly 216 LAKRNAGLTTSGFKVIHCSGYLKARIYP-DRGDGQGSLIQNLGLVAVGHSLPSSAITEIKLHQNM 279
Fly 280 FMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYR 344
Fly 345 FLTKGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREVKDLVLNEIQTGVVKREPISPAAQ- 408
Fly 409 -AAQAAQAAQAAQAAQAAQAAHVAQAVQAQVVVVPQQSVVVQPQCAGATGQPVGPGTPVSLALSA 472
Fly 473 SPKLDPYFEPELP-----LQPAVTPVP-------------------------------------- 494
Fly 495 ------------------PTNNSSSSSNN--NNGVWHHHHVQQQQQSGSMDHDSLSYTQLYPPLN 539
Fly 540 DLVVSSSSSVGGGTASSAGGGSSASASSSGVYSTEMQYPDTTTGNLYYNNNNHYYYDYDATVDVA 604
Fly 605 TSMIRPFSANSNSCSSSSESERQLSTGNAS-------IVNETSPSQTTYSDLSHNFELSYFSDNS 662
Fly 663 SQQHQHQQQQQHLMEQQH 680 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sim | NP_524340.2 | HLH | 26..78 | CDD:238036 | 47/51 (92%) |
PAS | 102..215 | CDD:279347 | 67/112 (60%) | ||
PAS | 102..163 | CDD:214512 | 55/60 (92%) | ||
PAS | 278..376 | CDD:238075 | 73/97 (75%) | ||
PAS_3 | 291..377 | CDD:285623 | 62/85 (73%) | ||
Sim1 | NP_001101111.1 | HLH | 2..52 | CDD:238036 | 45/49 (92%) |
PAS | 79..>141 | CDD:279347 | 55/61 (90%) | ||
PAS | 88..>158 | CDD:238075 | 51/94 (54%) | ||
PAS | 229..328 | CDD:238075 | 73/98 (74%) | ||
PAS_3 | 243..329 | CDD:285623 | 62/85 (73%) | ||
SIM_C | 360..668 | CDD:284122 | 57/337 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 139 | 1.000 | Domainoid score | I4663 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3558 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 476 | 1.000 | Inparanoid score | I1427 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 1 | 1.000 | - | - | otm46444 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106200 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23043 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X501 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.820 |